RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PCDHGA1	Q9Y5H4	931 aa		13.77	□□□□□ -0.21
NR1H3-231	ENST00000529540	AP1M2	Q9Y6Q5	423 aa		13.77	□□□□□ -0.21
NR1H3-231	ENST00000529540	IGKV1-8	A0A0C4DH67	115 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ANKDD1B	A6NHY2	528 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	FOXE1	O00358	373 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	WBP4	O75554	376 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ANKRD34C	P0C6C1	535 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	CYP4B1	P13584	511 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	TEK	Q02763	1124 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	CSTF3	Q12996	717 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	USP43	Q70EL4	1123 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	EIF3M	Q7L2H7	374 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZNF551	Q7Z340	670 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	GPR155	Q7Z3F1	870 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	GLRX5	Q86SX6	157 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	AKAP14	Q86UN6	197 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	PAQR7	Q86WK9	346 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZZZ3	Q8IYH5	903 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	C19orf47	Q8N9M1	422 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	OR7G3	Q8NG95	312 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	METTL2A	Q96IZ6	378 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	GFM1	Q96RP9	751 aa	Known RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZFYVE21	Q9BQ24	234 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	INPP5K	Q9BT40	448 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	ACPT	Q9BZG2	426 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	RHBG	Q9H310	441 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	PRM3	Q9NNZ6	103 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	KRT84	Q9NSB2	600 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	PDP1	Q9P0J1	537 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	SEMA5B	Q9P283	1151 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	SH2B3	Q9UQQ2	575 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	IFT52	Q9Y366	437 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	TESMIN	Q9Y4I5	508 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	MUC6	Q6W4X9	2439 aa		13.76	□□□□□ -0.21
NR1H3-231	ENST00000529540	PRAMEF4	O60810	478 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZNF682	O95780	498 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	MYF5	P13349	255 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CD22	P20273	847 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ARL4D	P49703	201 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CCL7	P80098	99 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZNF45	Q02386	682 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PRKCD	Q05655	676 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	KRR1	Q13601	381 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	DGCR6	Q14129	220 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	MAPK11	Q15759	364 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	VMAC	Q2NL98	169 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ATAD3B	Q5T9A4	648 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PRAMEF9	Q5VWM5	478 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	NKAIN2	Q5VXU1	208 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CBLL1	Q75N03	491 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CCDC80	Q76M96	950 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CCDC71	Q8IV32	467 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PSMA8	Q8TAA3	256 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	WDR20	Q8TBZ3	569 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	APH1B	Q8WW43	257 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RPL3L	Q92901	407 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RERG	Q96A58	199 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CMTM7	Q96FZ5	175 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	FCRL1	Q96LA6	429 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	EPYC	Q99645	322 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	MAP3K3	Q99759	626 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	HOXD1	Q9GZZ0	328 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PDE7B	Q9NP56	450 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	FKBP14	Q9NWM8	211 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	DLGAP4	Q9Y2H0	992 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	VPS13A	Q96RL7	3174 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	OTOGL	Q3ZCN5	2332 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	EVPLL	A8MZ36	301 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	NTN3	O00634	580 aa	Predicted RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	OR1F1	O43749	312 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CLEC3A	O75596	197 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RFPL3	O75679	317 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	LCK	P06239	509 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZNF24	P17028	368 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CDKN2C	P42773	168 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PCYT1A	P49585	367 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CLK1	P49759	484 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	HSD11B2	P80365	405 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	SMN1	Q16637	294 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	TOR1AIP1	Q5JTV8	583 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	MANEA	Q5SRI9	462 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	FAM92B	Q6ZTR7	304 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RNF44	Q7L0R7	432 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ASCL5	Q7RTU5	278 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PIP4P1	Q86T03	277 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	MFSD9	Q8NBP5	474 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	KBTBD8	Q8NFY9	601 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	CLHC1	Q8NHS4	586 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RHNO1	Q9BSD3	238 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	YIPF2	Q9BWQ6	316 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	SPATA9	Q9BWV2	254 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	NLN	Q9BYT8	704 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	ZNF768	Q9H5H4	540 aa	Known RBP	13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	POLE4	Q9NR33	117 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	SOHLH2	Q9NX45	425 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	KIF17	Q9P2E2	1029 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	RNF6	Q9Y252	685 aa		13.75	□□□□□ -0.21
NR1H3-231	ENST00000529540	PCM1	Q15154	2024 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms