RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KIAA0513O60268 411 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 RANBP6O60518 1105 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 NMT2O60551 498 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 SMPD2O60906 423 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 OR6A2O95222 327 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 SMC2O95347 1197 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 S100A6P06703 90 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 FHP07954 510 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 PRG2P13727 222 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 CAPN2P17655 700 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 ACAA2P42765 397 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 TNFSF10P50591 281 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 SLC12A3P55017 1021 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 VCPP55072 806 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 NUCB2P80303 420 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 ACY1Q03154 408 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 SPAG1Q07617 926 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 HSPA14Q0VDF9 509 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 TRDNQ13061 729 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 CUL2Q13617 745 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 STX1AQ16623 288 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 C9orf66Q5T8R8 295 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 AADACL4Q5VUY2 407 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 BNIPLQ7Z465 357 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 TAF8Q7Z7C8 310 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 CDC20BQ86Y33 519 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 CCDC65Q8IXS2 484 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 PEX5LQ8IYB4 626 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 FGFRL1Q8N441 504 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 CCDC197Q8NCU1 140 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 C5orf30Q96GV9 206 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 RCHY1Q96PM5 261 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 RAB40CQ96S21 281 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 SH3GL1Q99961 368 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 DDX50Q9BQ39 737 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 RBM24Q9BX46 236 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 TEX13AQ9BXU3 409 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 OSBPL8Q9BZF1 889 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 VCPKMTQ9H867 229 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 DDX18Q9NVP1 670 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 PIN4Q9Y237 131 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 DDX49Q9Y6V7 483 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 DNMBPQ6XZF7 1577 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 PPRC1Q5VV67 1664 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 WDR97A6NE52 1622 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 CFTRP13569 1480 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 IGHV3-16A0A0C4DH30 117 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 A0A1W2PRV1 198 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SYCE3A1L190 88 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SMIM30A4D0T7 59 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF724A8MTY0 619 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 H0YIV9 168 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 PSMD3O43242 534 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 GALR3O60755 368 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 KINO60870 393 aaKnown RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 FRAT2O75474 233 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 REC8O95072 547 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 OLFM2O95897 454 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 MMP10P09238 476 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SBK2P0C263 348 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 GPX3P22352 226 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 GDI1P31150 447 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 RFC4P35249 363 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SLC1A4P43007 532 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ALDH3B1P43353 468 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ARFIP1P53367 373 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ADARP55265 1226 aaKnown RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 NME5P56597 212 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 DSCR10P59022 87 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 STARD6P59095 220 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SHROOM1Q2M3G4 852 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 CFAP221Q4G0U5 840 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 HIGD2BQ4VC39 106 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 TPGS2Q68CL5 300 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ZYG11AQ6WRX3 759 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF730Q6ZMV8 503 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 NUFIP2Q7Z417 695 aaKnown RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SLC25A42Q86VD7 318 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 FBXW8Q8N3Y1 598 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 FAM133AQ8N9E0 248 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 CNNM3Q8NE01 707 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 BEST4Q8NFU0 473 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 OR6C4Q8NGE1 309 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 UBTD2Q8WUN7 234 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 FAM46BQ96A09 425 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 LRRC45Q96CN5 670 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 C8orf76Q96K31 380 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 FAM111AQ96PZ2 611 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 AGPAT1Q99943 283 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF577Q9BSK1 485 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 RPP25Q9BUL9 199 aaKnown RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 NTMT1Q9BV86 223 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 GCOM2Q9BZD3 368 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 SLC7A5P2Q9GIP4 190 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 WWP1Q9H0M0 922 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 RIBC2Q9H4K1 309 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 XKR8Q9H6D3 395 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms