RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 DTX4Q9Y2E6 619 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 FRG2CA6NGY1 282 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 NCF1BA6NI72 391 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 WASHC1A8K0Z3 465 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 A8MV72 311 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 NCF1CA8MVU1 366 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 SAP18O00422 153 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 HS3ST1O14792 307 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 KLF4O43474 513 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 ICOSLGO75144 302 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 SH3BGRLO75368 114 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 PPM1BO75688 479 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 CBR3O75828 277 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 TGFB1P01137 390 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 CGAP01215 116 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 THBDP07204 575 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 SLC35E2BP0CK96 405 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 SLC35E2P0CK97 266 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 CD8BP10966 210 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 NCF1P14598 390 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 SERPINB1P30740 379 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 BUD31P41223 144 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 KCNJ5P48544 419 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 RPS4XP62701 263 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 SNTA1Q13424 505 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 PDK4Q16654 411 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 HIST2H2ACQ16777 129 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 HIST2H2AA3Q6FI13 130 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 DESI1Q6ICB0 168 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 OR4C11Q6IEV9 310 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 P4HA3Q7Z4N8 544 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 ZCCHC7Q8N3Z6 543 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 ZNF615Q8N8J6 731 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 SNX31Q8N9S9 440 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 WDSUB1Q8N9V3 476 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 ANKRD49Q8WVL7 239 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 HGDQ93099 445 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 ZBED6CLQ96FA7 236 aaPredicted RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 NODALQ96S42 347 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 TMEM204Q9BSN7 226 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 OR51B5Q9H339 312 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 CNOT10Q9H9A5 744 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 CXorf21Q9HAI6 301 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 PPANQ9NQ55 473 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 TAS2R10Q9NYW0 307 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 HEY2Q9UBP5 337 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
DDX41-216ENST00000513562 EXO1Q9UQ84 846 aaKnown RBP9.89□□□□□ -0.83
DDX41-216ENST00000513562 DOCK7Q96N67 2140 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 SLC22A20A6NK97 555 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 OVOL3O00110 214 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 EMC8O43402 210 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 WIPF1O43516 503 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 BANF1O75531 89 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 PLAUP00749 431 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 NR2F6P10588 404 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 NAGAP17050 411 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 KRT15P19012 456 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 GPX3P22352 226 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 SRD5A2P31213 254 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 HSPA7P48741 367 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 IRF8Q02556 426 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 CHIT1Q13231 466 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 BCL2A1Q16548 175 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 FBXO48Q5FWF7 155 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 CDKL4Q5MAI5 379 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 DEPDC1Q5TB30 811 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 RNASEH2BQ5TBB1 312 aaKnown RBP9.88□□□□□ -0.83
DDX41-216ENST00000513562 ANKRD34AQ69YU3 496 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 MRM1Q6IN84 353 aaKnown RBP9.88□□□□□ -0.83
DDX41-216ENST00000513562 DNM1P46Q6ZS02 220 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 NUP54Q7Z3B4 507 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 IGDCC3Q8IVU1 814 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 GALNT12Q8IXK2 581 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 PPIL6Q8IXY8 311 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 RDH11Q8TC12 318 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 UBE2E3Q969T4 207 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 ESAMQ96AP7 390 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 CMTM7Q96FZ5 175 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 ZNF845Q96IR2 970 aaPredicted RBP9.88□□□□□ -0.83
DDX41-216ENST00000513562 NAT9Q9BTE0 207 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 NXF5Q9H1B4 397 aaKnown RBP9.88□□□□□ -0.83
DDX41-216ENST00000513562 OR10A5Q9H207 317 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 KLRF1Q9NZS2 232 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 CDC42EP3Q9UKI2 254 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 LAMP3Q9UQV4 416 aa9.88□□□□□ -0.83
DDX41-216ENST00000513562 A0A1W2PR48 441 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 GLOD5A6NK44 160 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 PLPP1O14494 284 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 STK16O75716 305 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 CT62P0C5K7 136 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 PCNAP12004 261 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 PPP3CBP16298 524 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 TBXA2RP21731 343 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 IDUAP35475 653 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 ZNF75DP51815 510 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 ARFIP1P53367 373 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms