RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PGBD2Q6P3X8 592 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 CFAP52Q8N1V2 620 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 SYT14Q8NB59 555 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 OR11H4Q8NGC9 324 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 FGF11Q92914 225 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 LRR1Q96L50 414 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 KLHL15Q96M94 604 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 CWH43Q9H720 699 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 CD93Q9NPY3 652 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 TVP23BQ9NYZ1 205 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 MALT1Q9UDY8 824 aa15.05■□□□□ 0
SCLT1-208ENST00000506368 RANBP2P49792 3224 aaKnown RBP15.05■□□□□ 0
SCLT1-208ENST00000506368 TEX13CA0A0J9YWL9 993 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.05■□□□□ -0
SCLT1-208ENST00000506368 C2orf78A6NCI8 922 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 CBX4O00257 560 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 PAHP00439 452 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 CHI3L1P36222 383 aaPredicted RBP15.05■□□□□ -0
SCLT1-208ENST00000506368 ZXDBP98169 803 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 BDH1Q02338 343 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 TLE2Q04725 743 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 CSTF1Q05048 431 aaKnown RBP15.05■□□□□ -0
SCLT1-208ENST00000506368 UBE3AQ05086 875 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 PDE7AQ13946 482 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 ZNF273Q14593 569 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 RAET1GQ6H3X3 334 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 TMIGD1Q6UXZ0 262 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 TFAP2EQ6VUC0 442 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.05■□□□□ -0
SCLT1-208ENST00000506368 OR2T4Q8NH00 348 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 ST8SIA4Q92187 359 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 CLP1Q92989 425 aaKnown RBP15.05■□□□□ -0
SCLT1-208ENST00000506368 PMEPA1Q969W9 287 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 TMEM175Q9BSA9 504 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 TRPM5Q9NZQ8 1165 aa15.05■□□□□ -0
SCLT1-208ENST00000506368 FFAR1O14842 300 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 PRAMEF4O60810 478 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ATG13O75143 517 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 NFATC1O95644 943 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ZDHHC11BP0C7U3 371 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ICAM2P13598 275 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 FEN1P39748 380 aaKnown RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 MAPK8P45983 427 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 PITPNBP48739 271 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 EPHA5P54756 1037 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 DCDC1P59894 354 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 DSTNP60981 165 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 CDK5Q00535 292 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ZNF763Q0D2J5 394 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 LEXMQ3ZCV2 418 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 PRAMEF9Q5VWM5 478 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 HBMQ6B0K9 141 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 RRM2BQ7LG56 351 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 OAFQ86UD1 273 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 WRAP53Q9BUR4 548 aaKnown RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 ZNF436Q9C0F3 470 aaPredicted RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 TMEM161AQ9NX61 479 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 LHX3Q9UBR4 397 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 CLCA2Q9UQC9 943 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 MTMR11A4FU01 709 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 MFSD2BA6NFX1 497 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 GABRPO00591 440 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 SOX14O95416 240 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 MPC2O95563 127 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 RECKO95980 971 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 POMCP01189 267 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 TCRBP04435 133 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ACSM4P0C7M7 580 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 LIM2P55344 173 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 CTBP2P56545 445 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 PFN3P60673 137 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ARF5P84085 180 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 CYP4F8P98187 520 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 TAF10Q12962 218 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ZXDCQ2QGD7 858 aaPredicted RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 MRGPREQ86SM8 312 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 MARCH9Q86YJ5 346 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 CMIPQ8IY22 773 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 MS4A15Q8N5U1 240 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ZNF485Q8NCK3 441 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 DBF4BQ8NFT6 615 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 OR52N1Q8NH53 320 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 RFKQ969G6 155 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 RNFT2Q96EX2 444 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 SENP5Q96HI0 755 aaPredicted RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 FUZQ9BT04 418 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 OSGEPL1Q9H4B0 414 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ENAMQ9NRM1 1142 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 NUDT15Q9NV35 164 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 ZMAT5Q9UDW3 170 aaKnown RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 YARS2Q9Y2Z4 477 aaKnown RBP15.04■□□□□ -0
SCLT1-208ENST00000506368 ZNF175Q9Y473 711 aa15.04■□□□□ -0
SCLT1-208ENST00000506368 GNG14A0A1W2PPG7 69 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 C5orf58C9J3I9 102 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 GPR171O14626 319 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 PRAF2O60831 178 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 ELK1P19419 428 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 RAB3AP20336 220 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 LCN1P31025 176 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms