RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GABRA1P14867 456 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 NAGAP17050 411 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 S1PR1P21453 382 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ZFP36L2P47974 494 aaKnown RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 CCT5P48643 541 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ALDH9A1P49189 494 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 NUP107P57740 925 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 FBXW4P57775 412 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 SF3B4Q15427 424 aaKnown RBP eCLIP10.98□□□□□ -0.656e-7■□□□□ 9.1
MED28-203ENST00000503945 FAM153CQ494X1 144 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 SPNS3Q6ZMD2 512 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 MEX3BQ6ZN04 569 aaKnown RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 GPRIN3Q6ZVF9 776 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 NUP54Q7Z3B4 507 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 CCDC71Q8IV32 467 aaPredicted RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 LRRC25Q8N386 305 aaPredicted RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 VWA5B2Q8N398 1253 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ZNF441Q8N8Z8 693 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ACBD4Q8NC06 268 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 SPPL2AQ8TCT8 520 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 KLHL29Q96CT2 875 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 CCDC126Q96EE4 140 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ZNF382Q96SR6 550 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ANGPTL4Q9BY76 406 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 PROK2Q9HC23 129 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 MCCC2Q9HCC0 563 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 PSMC3IPQ9P2W1 217 aaPredicted RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 TNFRSF10DQ9UBN6 386 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 PRODH2Q9UF12 536 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 TBK1Q9UHD2 729 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 ZNF225Q9UK10 706 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 UTS2RQ9UKP6 389 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 CNOT11Q9UKZ1 510 aaKnown RBP10.98□□□□□ -0.65
MED28-203ENST00000503945 PCDHGB3Q9Y5G1 929 aa10.98□□□□□ -0.65
MED28-203ENST00000503945 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 GNG14A0A1W2PPG7 69 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 TRIM3O75382 744 aaPredicted RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 BCAS2O75934 225 aaPredicted RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 TOXO94900 526 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 ENO1P06733 434 aaKnown RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 GLI4P10075 376 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 DRD5P21918 477 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 GDF1P27539 372 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 MASP1P48740 699 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 PKNOX1P55347 436 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 NAA20P61599 178 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 DCAF7P61962 342 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 ACSM2AQ08AH3 577 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 CSTF3Q12996 717 aaKnown RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 LCP2Q13094 533 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 HEPACAMQ14CZ8 416 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 RPS6KA2Q15349 733 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 TOMM20Q15388 145 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 PRICKLE4Q2TBC4 344 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 ACSM2BQ68CK6 577 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 FAM111BQ6SJ93 734 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 CCDC116Q8IYX3 515 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 SAMD14Q8IZD0 417 aaPredicted RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 RPRMLQ8N4K4 120 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 CCNYL1Q8N7R7 359 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 ADCY4Q8NFM4 1077 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 NEIL3Q8TAT5 605 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 HSPBAP1Q96EW2 488 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 LCORQ96JN0 433 aaPredicted RBP10.97□□□□□ -0.65
MED28-203ENST00000503945 GNRHR2Q96P88 292 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 HBEGFQ99075 208 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 PFDN4Q9NQP4 134 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 MCM8Q9UJA3 840 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 DLGAP4Q9Y2H0 992 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 LIPGQ9Y5X9 500 aa10.97□□□□□ -0.65
MED28-203ENST00000503945 EML6Q6ZMW3 1958 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 C15orf38-AP3S2A0A0A6YYH1 394 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 NKX2-6A6NCS4 301 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 LRATO95237 230 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ABCB1P08183 1280 aaPredicted RBP10.96□□□□□ -0.65
MED28-203ENST00000503945 MYL2P10916 166 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ABCD3P28288 659 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 MPIP34949 423 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 CASP3P42574 277 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 PPICP45877 212 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 TRPC1P48995 793 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 BTKQ06187 659 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 MGAT2Q10469 447 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 DUSP8Q13202 625 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 TRMT12Q53H54 448 aaKnown RBP10.96□□□□□ -0.65
MED28-203ENST00000503945 SPIN4Q56A73 249 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 SPDYAQ5MJ70 313 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 CLYBLQ8N0X4 340 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 EIF1ADQ8N9N8 165 aaKnown RBP10.96□□□□□ -0.65
MED28-203ENST00000503945 L3HYPDHQ96EM0 354 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ZNF597Q96LX8 424 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ZNF681Q96N22 645 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 RILPQ96NA2 401 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 TMEM237Q96Q45 408 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 TREX2Q9BQ50 279 aaPredicted RBP10.96□□□□□ -0.65
MED28-203ENST00000503945 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms