RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 KCNK5O95279 499 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CYC1P08574 325 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 AVPR2P30518 371 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 OLR1P78380 273 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 BNIP3Q12983 259 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TMEM44Q2T9K0 475 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CRB2Q5IJ48 1285 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SPRED1Q7Z699 444 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CALHM3Q86XJ0 350 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ZNF619Q8N2I2 560 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 NETO1Q8TDF5 533 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 KAT2AQ92830 837 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MRPL48Q96GC5 212 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 SDHAF3Q9NRP4 125 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 AGPAT4Q9NRZ5 378 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 GIN1Q9NXP7 522 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MGAT4BQ9UQ53 548 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TCF20Q9UGU0 1960 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 PRAMEF33A0A0G2JMD5 474 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ASPDHA6ND91 283 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ENO4A6NNW6 628 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SYT5O00445 386 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 FAAHO00519 579 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CKMT2P17540 419 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CDH12P55289 794 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 NUP107P57740 925 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 DCDP81605 110 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 IL5RAQ01344 420 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CCDC92Q53HC0 331 aaPredicted RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 ZNF385BQ569K4 471 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ADNP2Q6IQ32 1131 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SLC23A3Q6PIS1 610 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 RBM44Q6ZP01 1051 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 CCDC80Q76M96 950 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 VANGL1Q8TAA9 524 aaPredicted RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 ZNF675Q8TD23 568 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MR1Q95460 341 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SLC38A2Q96QD8 506 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MACROD1Q9BQ69 325 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MENTQ9BUN1 341 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ADI1Q9BV57 179 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 IL1RAPQ9NPH3 570 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SERHLQ9NQF3 203 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 C19orf53Q9UNZ5 99 aaPredicted RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 TMEM5Q9Y2B1 443 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 PDLIM1O00151 329 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 HMGN2P05204 90 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 NELFEP18615 380 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 LCN1P31025 176 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 GALNSP34059 522 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 CDK9P50750 372 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP54-215ENST00000497106 COLEC12Q5KU26 742 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 NKAIN2Q5VXU1 208 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 C18orf63Q68DL7 685 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SLITRK4Q8IW52 837 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TMEM151BQ8IW70 566 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TMCO5AQ8N6Q1 288 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 OR10G2Q8NGC3 310 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 RAB8BQ92930 207 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ELP4Q96EB1 424 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 DEPDC7Q96QD5 511 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 EPYCQ99645 322 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 PIGUQ9H490 435 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 OAZ3Q9UMX2 235 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ENPP4Q9Y6X5 453 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 LOC105369274A0A096LPK9 316 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 LOC102723532A0A0G2JNH3 316 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SCDO00767 359 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SCRG1O75711 98 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SEC24DO94855 1032 aaPredicted RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 TTKP33981 857 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 GABRA3P34903 492 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 WNT3P56703 355 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 ID2Q02363 134 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 DSG2Q14126 1118 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 TRAM2Q15035 370 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SHQ1Q6PI26 577 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 ZNF730Q6ZMV8 503 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 OR4N4Q8N0Y3 316 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 D2HGDHQ8N465 521 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 PAPD5Q8NDF8 572 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 OIT3Q8WWZ8 545 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 OR7D2Q96RA2 312 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 GAL3ST4Q96RP7 486 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 YIPF4Q9BSR8 244 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MRPS26Q9BYN8 205 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 ZNF768Q9H5H4 540 aaKnown RBP7.87□□□□□ -1.15
USP54-215ENST00000497106 TMEM9BQ9NQ34 198 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 SLC25A37Q9NYZ2 338 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 PILRAQ9UKJ1 303 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 GMEB1Q9Y692 573 aa7.87□□□□□ -1.15
USP54-215ENST00000497106 MN1Q10571 1320 aaPredicted RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 PLOD2O00469 737 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 CTSVO60911 334 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ANKRD34CP0C6C1 535 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 UBTFL6P0CB48 400 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms