RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TTC3P53804 2025 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 DSPPQ9NZW4 1301 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 NCF1BA6NI72 391 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 NCF1CA8MVU1 366 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 NPIPB8E9PQR5 432 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SSNA1O43805 119 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PRMT3O60678 531 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SC5DO75845 299 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 HTR3BO95264 441 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 HRGP04196 525 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 HAPLN1P10915 354 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 PPP3CBP16298 524 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 ENGP17813 658 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SPI1P17947 270 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 MAPK3P27361 379 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 LIMS1P48059 325 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CTBP2P56545 445 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 DAOAP59103 153 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SPIBQ01892 262 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SRSF11Q05519 484 aaKnown RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 PLD1Q13393 1074 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 ILKQ13418 452 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 IFI44LQ53G44 452 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PYHIN1Q6K0P9 492 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TRMT11Q7Z4G4 463 aaKnown RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 TSEN54Q7Z6J9 526 aaKnown RBP8.6□□□□□ -1.03
HPS4-217ENST00000496385 PAQR7Q86WK9 346 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SLITRK4Q8IW52 837 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 FAM71CQ8NEG0 241 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 OR5M9Q8NGP3 310 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 RPLP0P6Q8NHW5 317 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TADA1Q96BN2 335 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 GAL3ST1Q99999 423 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SLC39A8Q9C0K1 460 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 LATS2Q9NRM7 1088 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 RLIMQ9NVW2 624 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PPP1R14DQ9NXH3 145 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 EXTL2Q9UBQ6 330 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 SEC14L3Q9UDX4 400 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 MALT1Q9UDY8 824 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 NEU3Q9UQ49 428 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 MED16Q9Y2X0 877 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 PCDHB7Q9Y5E2 793 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 TRANK1O15050 2925 aa8.6□□□□□ -1.03
HPS4-217ENST00000496385 OR51F1A6NGY5 319 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 HMSDA8MTL9 139 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MCRIP1C9JLW8 97 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 HPP00738 406 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 POMCP01189 267 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CA3P07451 260 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 GIPP09681 153 aaPredicted RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 PRPH2P23942 346 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 S100A11P31949 105 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 PCGF2P35227 344 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 AVPR1BP47901 424 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 RAP2BP61225 183 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
HPS4-217ENST00000496385 ST3GAL2Q16842 350 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 EXOC3L2Q2M3D2 409 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 FBXO48Q5FWF7 155 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 TEX30Q5JUR7 227 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CLLU1OSQ5K130 101 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 DGKKQ5KSL6 1271 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 SLC22A10Q63ZE4 541 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 SLC27A1Q6PCB7 646 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 UQCC3Q6UW78 93 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 OR1S1Q8NH92 325 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 ZDHHC1Q8WTX9 485 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 NDRG1Q92597 394 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 PIP5K1AQ99755 562 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 DDX31Q9H8H2 851 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 IPPKQ9H8X2 491 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 ZNF334Q9HCZ1 680 aaPredicted RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 ENAMQ9NRM1 1142 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MRPS18AQ9NVS2 196 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 SPHK1Q9NYA1 384 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MED11Q9P086 117 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 YBX2Q9Y2T7 364 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 SPIN1Q9Y657 262 aaPredicted RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 A0A0U1RQF3 1178 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 ADAP00813 363 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 HLA-DPB1P04440 258 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 THP07101 528 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 EBLN1P0CF75 366 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 GABRA1P14867 456 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CPN1P15169 458 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 HLA-DPA1P20036 260 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 RAB3BP20337 219 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CCR1P32246 355 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CDKN2CP42773 168 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 PITPNBP48739 271 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MAZP56270 477 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 RBBP4Q09028 425 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 UBXN2BQ14CS0 331 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 ZNF124Q15973 351 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 C12orf73Q69YU5 71 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 TMEM91Q6ZNR0 172 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 GPR65Q8IYL9 337 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms