RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TMEM198Q66K66 360 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 TRABD2AQ86V40 505 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 CD163Q86VB7 1156 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 HOMEZQ8IX15 550 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 BANPQ8N9N5 519 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 OR52R1Q8NGF1 315 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 AENQ8WTP8 325 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 PHF10Q8WUB8 498 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 APOPT1Q96IL0 206 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 BBS4Q96RK4 519 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 TRMOQ9BU70 441 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 DOHHQ9BU89 302 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 RUBCNLQ9H714 662 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 CHST11Q9NPF2 352 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 SLC35C2Q9NQQ7 365 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 ZNF639Q9UID6 485 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 CHCHD2Q9Y6H1 151 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 ANKRD33BA6NCL7 494 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 SLC28A1O00337 649 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 NAGAP17050 411 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 GPX3P22352 226 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 HTR1EP28566 365 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 FBXW4P57775 412 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 DCAF7P61962 342 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 RPS6KA2Q15349 733 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 GXYLT1Q4G148 440 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 TRILQ7L0X0 811 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 FAM76AQ8TAV0 307 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 CTHRC1Q96CG8 243 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 HSPBAP1Q96EW2 488 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 C11orf24Q96F05 449 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 LCORQ96JN0 433 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 SMC6Q96SB8 1091 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 SECISBP2Q96T21 854 aaKnown RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 GATA5Q9BWX5 397 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 NXF5Q9H1B4 397 aaKnown RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 TP63Q9H3D4 680 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 MKS1Q9NXB0 559 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 COQ3Q9NZJ6 369 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 EHD3Q9NZN3 535 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 B4GALT7Q9UBV7 327 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 LGALS13Q9UHV8 139 aa16.4■□□□□ 0.22
ABCF3-217ENST00000489719 CNOT11Q9UKZ1 510 aaKnown RBP16.4■□□□□ 0.22
ABCF3-217ENST00000489719 OR14I1A6ND48 311 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ADAM10O14672 748 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 BCKDKO14874 412 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 AZIN1O14977 448 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 HNRNPRO43390 633 aaKnown RBP16.39■□□□□ 0.21
ABCF3-217ENST00000489719 RGS14O43566 566 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SUSD5O60279 629 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SPAG7O75391 227 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SEC22BO75396 215 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 RSL1D1O76021 490 aaKnown RBP16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SNX4O95219 450 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 CHEK2O96017 543 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 IGHG3P01860 377 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 PCSK2P16519 638 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 DDCP20711 480 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 DRD5P21918 477 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 PPICP45877 212 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 MAN2A2P49641 1150 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 DUSP2Q05923 314 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ZNF763Q0D2J5 394 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 LTB4RQ15722 352 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ZNF630Q2M218 657 aaPredicted RBP16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 CLEC6AQ6EIG7 209 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 NUP54Q7Z3B4 507 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 PACS2Q86VP3 889 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 PRR22Q8IZ63 422 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SPPL2AQ8TCT8 520 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ERP27Q96DN0 273 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 METTL2AQ96IZ6 378 aaKnown RBP16.39■□□□□ 0.21
ABCF3-217ENST00000489719 FAM111AQ96PZ2 611 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 DMRTA2Q96SC8 542 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 PROK2Q9HC23 129 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 ACAD8Q9UKU7 415 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 MYO7BQ6PIF6 2116 aa16.39■□□□□ 0.21
ABCF3-217ENST00000489719 DIDO1Q9BTC0 2240 aaKnown RBP16.38■□□□□ 0.21
ABCF3-217ENST00000489719 TRGV5A0A0B4J1U4 118 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 A0A1B0GVC2 190 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 ACOX3O15254 700 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 HCN1O60741 890 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 LRATO95237 230 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 CLDN14O95500 239 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 CBX7O95931 251 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 ABCD3P28288 659 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 MRPS35P82673 323 aaKnown RBP16.38■□□□□ 0.21
ABCF3-217ENST00000489719 PCLAFQ15004 111 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 NOXRED1Q6NXP6 359 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 OR5M9Q8NGP3 310 aa16.38■□□□□ 0.21
ABCF3-217ENST00000489719 OR9A2Q8NGT5 310 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms