RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ACKR1Q16570 336 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 ZNF789Q5FWF6 425 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 LRRC38Q5VT99 294 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 REP15Q6BDI9 236 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 SNRNP48Q6IEG0 339 aaKnown RBP3.06□□□□□ -1.92
LINC00888-204ENST00000487386 ZNF530Q6P9A1 599 aaPredicted RBP3.06□□□□□ -1.92
LINC00888-204ENST00000487386 BCORQ6W2J9 1755 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 KCPQ6ZWJ8 1503 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 C17orf64Q86WR6 236 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 TUSC5Q8IXB3 177 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 ZBED8Q8IZ13 594 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 CARNMT1Q8N4J0 409 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 CD177Q8N6Q3 437 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 GVQW1Q8N7I0 195 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 BEST4Q8NFU0 473 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 SPATA18Q8TC71 538 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 CDKN2AIPNLQ96HQ2 116 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 KIF16BQ96L93 1317 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 RAB40CQ96S21 281 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 RANBP9Q96S59 729 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 THUMPD2Q9BTF0 503 aaKnown RBP3.06□□□□□ -1.92
LINC00888-204ENST00000487386 PCDH11XQ9BZA7 1347 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 PNNQ9H307 717 aaKnown RBP3.06□□□□□ -1.92
LINC00888-204ENST00000487386 DNAJC17Q9NVM6 304 aaKnown RBP3.06□□□□□ -1.92
LINC00888-204ENST00000487386 PLEK2Q9NYT0 353 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 PSORS1C1Q9UIG5 152 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 OR1A2Q9Y585 309 aa3.06□□□□□ -1.92
LINC00888-204ENST00000487386 RALGAPA1Q6GYQ0 2036 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ITGB4P16144 1822 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ANKRD36CQ5JPF3 1778 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 COL5A3P25940 1745 aaPredicted RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TMCO5BA8MYB1 307 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TOM1O60784 492 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 CSO75390 466 aaKnown RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 OR9G9P0C7N8 305 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 RPL27P61353 136 aaKnown RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TYSND1Q2T9J0 566 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 LIPJQ5W064 366 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 WDR25Q64LD2 544 aaPredicted RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ZNF600Q6ZNG1 722 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TOM1L2Q6ZVM7 507 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 OTOAQ7RTW8 1153 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ASPGQ86U10 573 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 HOOK3Q86VS8 718 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 SAMD12Q8N8I0 201 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ZNF491Q8N8L2 437 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 GOT1L1Q8NHS2 421 aaPredicted RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TCP11Q8WWU5 503 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 PRCCQ92733 491 aaPredicted RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 PNPLA2Q96AD5 504 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 PCED1BQ96HM7 432 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 PLEKHF1Q96S99 279 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 UTP14AQ9BVJ6 771 aaKnown RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 ZBP1Q9H171 429 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 FAM212BQ9NTI7 297 aaPredicted RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 BTAF1O14981 1849 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 LAMB2P55268 1798 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 C4AP0C0L4 1744 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 C4BP0C0L5 1744 aa3.05□□□□□ -1.92
LINC00888-204ENST00000487386 TNS1Q9HBL0 1735 aaKnown RBP3.05□□□□□ -1.92
LINC00888-204ENST00000487386 RREB1Q92766 1687 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 FAM149AA5PLN7 773 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 STX6O43752 255 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 KIAA0513O60268 411 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 EPOP01588 193 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 PIGRP01833 764 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 GIG44P09565 113 aaPredicted RBP3.04□□□□□ -1.92
LINC00888-204ENST00000487386 GPX3P22352 226 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ADARP55265 1226 aaKnown RBP3.04□□□□□ -1.92
LINC00888-204ENST00000487386 RIPK4P57078 832 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ST8SIA6P61647 398 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 TRA2BP62995 288 aaKnown RBP3.04□□□□□ -1.92
LINC00888-204ENST00000487386 NAAAQ02083 359 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 NFE2L1Q14494 772 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 OR1C1Q15619 314 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 LTB4RQ15722 352 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 PAMR1Q6UXH9 720 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 LINC00696Q6ZRV3 163 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 WDR49Q8IV35 697 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 LAX1Q8IWV1 398 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 NKAIN3Q8N8D7 197 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 CCDC197Q8NCU1 140 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 TRPV3Q8NET8 790 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 OR1K1Q8NGR3 316 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 GOLGA5Q8TBA6 731 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 GGHQ92820 318 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 TEKT1Q969V4 418 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ZNF414Q96IQ9 312 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 CNOT6LQ96LI5 555 aaKnown RBP3.04□□□□□ -1.92
LINC00888-204ENST00000487386 PANX3Q96QZ0 392 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 S1PR3Q99500 378 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ADPGKQ9BRR6 497 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 CUTCQ9NTM9 273 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ARMCX1Q9P291 453 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 B4GALT7Q9UBV7 327 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 ERVK-19Q9WJR5 959 aa3.04□□□□□ -1.92
LINC00888-204ENST00000487386 DDX60Q8IY21 1712 aaKnown RBP3.04□□□□□ -1.92
LINC00888-204ENST00000487386 CEMIPQ8WUJ3 1361 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms