RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CCDC166P0CW27 439 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 NR2F6P10588 404 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 S1PR1P21453 382 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 CRYGSP22914 178 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 SERPINB1P30740 379 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 CPOXP36551 454 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 MC3RP41968 323 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 PCYT1AP49585 367 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 LHX2P50458 406 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 CLDN18P56856 261 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 PPP2R2BQ00005 443 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 MORF4L2Q15014 288 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 TOMM20Q15388 145 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 ZKSCAN8Q15776 578 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-228ENST00000487354 GRHL2Q6ISB3 625 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 C17orf47Q8NEP4 570 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 RGMAQ96B86 450 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 LRRC39Q96DD0 335 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 UBXN10Q96LJ8 280 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 GSX2Q9BZM3 304 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 NXF5Q9H1B4 397 aaKnown RBP13.93□□□□□ -0.18
MCF2L-228ENST00000487354 SERHLQ9NQF3 203 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 CD274Q9NZQ7 290 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
MCF2L-228ENST00000487354 C2orf72A6NCS6 295 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 CAPN14A8MX76 684 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 H0Y3Z8 333 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 PGRMC2O15173 223 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 CRLF1O75462 422 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 CNOT4O95628 575 aaKnown RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 BUD31P41223 144 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 PTH2RP49190 550 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 STARP49675 285 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 TMED10P49755 219 aaKnown RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 POU4F1Q01851 419 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 SRYQ05066 204 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 DLG1Q12959 904 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 DDX39BQ13838 428 aaKnown RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 ZNF474Q6S9Z5 364 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 OR1J4Q8NGS1 313 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 EXT2Q93063 718 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 UBE2E3Q969T4 207 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 STARD4Q96DR4 205 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 PIK3IP1Q96FE7 263 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 MTERF1Q99551 399 aaKnown RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 OR10A5Q9H207 317 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 DDX31Q9H8H2 851 aaKnown RBP13.92□□□□□ -0.18
MCF2L-228ENST00000487354 NDRG3Q9UGV2 375 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 MAPRE3Q9UPY8 281 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 TSC22D4Q9Y3Q8 395 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
MCF2L-228ENST00000487354 ABCA1O95477 2261 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 CXorf49A8MYA2 514 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-228ENST00000487354 E7ESA3 106 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 MSTNO14793 375 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 CASKO14936 926 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 ICOSLGO75144 302 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 PPM1BO75688 479 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 RHOXF2BP0C7M4 288 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 FAM58BPP0C7Q3 252 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 PAX1P15863 534 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 FPR1P21462 350 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 TLX1P31314 330 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-228ENST00000487354 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 ARFIP1P53367 373 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 ATP6V0D1P61421 351 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 RPS13P62277 151 aaKnown RBP13.91□□□□□ -0.18
MCF2L-228ENST00000487354 CBLBQ13191 982 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 SETDB1Q15047 1291 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 NNATQ16517 81 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 C20orf204Q6ZNR8 217 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 GALNT12Q8IXK2 581 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 FBXO36Q8NEA4 188 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 ATOH8Q96SQ7 321 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 OSBPL9Q96SU4 736 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-228ENST00000487354 OSBPL11Q9BXB4 747 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 LYARQ9NX58 379 aaKnown RBP13.91□□□□□ -0.18
MCF2L-228ENST00000487354 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
MCF2L-228ENST00000487354 NBEAL1Q6ZS30 2694 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 PLOD2O00469 737 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 CES2O00748 559 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 SOX30O94993 753 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 NID1P14543 1247 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 ZNF708P17019 499 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 CNTFP26441 200 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 MGAT2Q10469 447 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 OR52E8Q6IFG1 317 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 GPR22Q99680 433 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 METTL7AQ9H8H3 244 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
MCF2L-228ENST00000487354 EXO1Q9UQ84 846 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms