RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 RAD51AP1Q96B01 352 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 LINGO1Q96FE5 620 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ZNF764Q96H86 408 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PDLIM5Q96HC4 596 aaKnown RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 OR2A14Q96R47 310 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 TXNDC16Q9P2K2 825 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 SATB2Q9UPW6 733 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PDE10AQ9Y233 779 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 MN1Q10571 1320 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 KIF26BQ2KJY2 2108 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 GSAPA4D1B5 854 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC9B1P1A6NJY1 282 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 FOXO6A8MYZ6 492 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 TMX2-CTNND1H3BSU7 103 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 CYR61O00622 381 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 RASGRF2O14827 1237 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC16A5O15375 505 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 HCRTR1O43613 425 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 ZBTB14O43829 449 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC16A8O95907 504 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 C2P06681 752 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 ABHD2P08910 425 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 RFPL3SP0C7P2 107 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC35E2BP0CK96 405 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 CCDC166P0CW27 439 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PVRP15151 417 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 FOLR1P15328 257 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 UGT2B7P16662 529 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 STMN1P16949 149 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SHMT2P34897 504 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 IDUAP35475 653 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PGM1P36871 562 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 MSH2P43246 934 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 RGS4P49798 205 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 RAB28P51157 221 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 RAB10P61026 200 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 NAB1Q13506 487 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 TRA2AQ13595 282 aaKnown RBP eCLIP5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 ZKSCAN8Q15776 578 aaPredicted RBP5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 ZIC1Q15915 447 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 TTC23LQ6PF05 361 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 KLHL35Q6PF15 583 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PCSK4Q6UW60 755 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SUSD1Q6UWL2 747 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 MBOAT1Q6ZNC8 495 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 TRIM73Q86UV7 250 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 OOSP2Q86WS3 158 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 DCUN1D3Q8IWE4 304 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 FBXO39Q8N4B4 442 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 BMPERQ8N8U9 685 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PPFIBP2Q8ND30 876 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 OR2A1Q8NGT9 310 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 OR2L8Q8NGY9 312 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 WDR36Q8NI36 951 aaKnown RBP5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 HMGCLL1Q8TB92 370 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 AENQ8WTP8 325 aaKnown RBP5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC41A2Q96JW4 573 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 FOPNLQ96NB1 174 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PAFAH2Q99487 392 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 POLR1BQ9H9Y6 1135 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PARVBQ9HBI1 364 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 POPDC3Q9HBV1 291 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 SYTL2Q9HCH5 934 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 OR6C2Q9NZP2 312 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 POMT2Q9UKY4 750 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 HSF4Q9ULV5 492 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 KLHL20Q9Y2M5 609 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 LOXL2Q9Y4K0 774 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 PDZD2O15018 2839 aa5.87□□□□□ -1.47
RTFDC1-209ENST00000487211 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 AHCTF1Q8WYP5 2266 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 EFCAB7A8K855 629 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 C2orf74A8MZ97 194 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 RRHO14718 337 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 DSCR3O14972 297 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 TOX3O15405 576 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 TNFSF15O95150 251 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 GUCA1CO95843 209 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 SYF2O95926 243 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 CATP04040 527 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 RPN2P04844 631 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 C8GP07360 202 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 INHBAP08476 426 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 ANKRD34CP0C6C1 535 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 ERGP11308 486 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 CD1DP15813 335 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 ST6GAL1P15907 406 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 NELFEP18615 380 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 PSMB5P28074 263 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 IMPA1P29218 277 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 CRABP2P29373 138 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 TYK2P29597 1187 aa5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 CSTF2P33240 577 aaKnown RBP eCLIP5.86□□□□□ -1.47
RTFDC1-209ENST00000487211 HSD17B3P37058 310 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms