RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HSD3B1P14060 373 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CELP19835 753 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 SELENOPP49908 381 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 PFN3P60673 137 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ZP1P60852 638 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ERVK-21P61565 698 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RAB40BQ12829 278 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 COX10Q12887 443 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 DOC2AQ14183 400 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OPCMLQ14982 345 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 DUSP6Q16828 381 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RPS26P11Q5JNZ5 115 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 TCTN3Q6NUS6 607 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 TRIM40Q6P9F5 258 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 NLRC3Q7RTR2 1065 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OXR1Q8N573 874 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 TTC9BQ8N6N2 239 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF485Q8NCK3 441 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OR5M3Q8NGP4 307 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 FBXO32Q969P5 355 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 SCRN2Q96FV2 425 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 C12orf66Q96MD2 445 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 FOPNLQ96NB1 174 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ERMAPQ96PL5 475 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 WFDC6Q9BQY6 131 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OSGEPL1Q9H4B0 414 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 C11orf49Q9H6J7 331 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 MVB12BQ9H7P6 319 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CCSER2Q9H7U1 834 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 PRM3Q9NNZ6 103 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 BRD7Q9NPI1 651 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RGS17Q9UGC6 210 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GLS2Q9UI32 602 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CENPFP49454 3210 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 FAAHO00519 579 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CLDN7O95471 211 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 HLA-DPB1P04440 258 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CBSLP0DN79 551 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ARAFP10398 606 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 LCN1P31025 176 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CBSP35520 551 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RFX3P48380 749 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GIPRP48546 466 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 PITPNBP48739 271 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CCR6P51684 374 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ARF5P84085 180 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 MC1RQ01726 317 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 TAF10Q12962 218 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ATP13A5Q4VNC0 1218 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 LIPJQ5W064 366 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 WASH2PQ6VEQ5 465 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RASSF6Q6ZTQ3 369 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 VRK3Q8IV63 474 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GPC2Q8N158 579 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 UXS1Q8NBZ7 420 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GPR32P1Q8NGA4 272 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CHFRQ96EP1 664 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 SFXN2Q96NB2 322 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 OR4K3Q96R72 315 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 UQCC2Q9BRT2 126 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF416Q9BWM5 594 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 PDGFDQ9GZP0 370 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 METTL17Q9H7H0 456 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ZFYVE1Q9HBF4 777 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 BEX1Q9HBH7 125 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 NMRK2Q9NPI5 230 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 MRPS18AQ9NVS2 196 aaKnown RBP10.07□□□□□ -0.8
CCDC171-208ENST00000486641 COPS3Q9UNS2 423 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 BAIAP2Q9UQB8 552 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ANGPT4Q9Y264 503 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 HELZP42694 1942 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MTMR11A4FU01 709 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 A8MXK9 166 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 KRBOX1C9JBD0 128 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 E7EQ34 232 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 NFKBIEO00221 500 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SSNA1O43805 119 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 B4GALT3O60512 393 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 GBAP04062 536 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 H1F0P07305 194 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 RHOCP08134 193 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF8P17098 575 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 POU3F2P20265 443 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MMP12P39900 470 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 DGKGP49619 791 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 HNMTP50135 292 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SGSHP51688 502 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 CDH4P55283 916 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 LRRC74AQ0VAA2 488 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MPEG1Q2M385 716 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 C3P1Q6ZMU1 363 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 DEF8Q6ZN54 512 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms