RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OR10A5Q9H207 317 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 DDX31Q9H8H2 851 aaKnown RBP11.69□□□□□ -0.54
UBR4-213ENST00000483922 CNOT10Q9H9A5 744 aaKnown RBP11.69□□□□□ -0.54
UBR4-213ENST00000483922 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 SERHLQ9NQF3 203 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 ANK2Q01484 3957 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 A0A1W2PNV4 684 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 LRRC14BA6NHZ5 514 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 C17orf51A8MQB3 221 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CASKO14936 926 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 DYRK3O43781 588 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CRLF1O75462 422 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CNOT4O95628 575 aaKnown RBP11.68□□□□□ -0.54
UBR4-213ENST00000483922 FAM58BPP0C7Q3 252 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 MTHFD2P13995 350 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 NID1P14543 1247 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 GPX3P22352 226 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CRYGSP22914 178 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CCKARP32238 428 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CPA2P48052 419 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 LHX2P50458 406 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 NEK2P51955 445 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CLDN15P56746 228 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 CLDN18P56856 261 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 POU4F1Q01851 419 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 RCAN2Q14206 197 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 MORF4L2Q15014 288 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 ZKSCAN8Q15776 578 aaPredicted RBP11.68□□□□□ -0.54
UBR4-213ENST00000483922 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 TMEM81Q6P7N7 255 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 BTLAQ7Z6A9 289 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 RDH11Q8TC12 318 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 LRRC39Q96DD0 335 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 PIK3IP1Q96FE7 263 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 TM9SF2Q99805 663 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 OR2B2Q9GZK3 357 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 HEY2Q9UBP5 337 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 NDRG3Q9UGV2 375 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 PHF11Q9UIL8 331 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 MAPRE3Q9UPY8 281 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 EXO1Q9UQ84 846 aaKnown RBP11.68□□□□□ -0.54
UBR4-213ENST00000483922 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
UBR4-213ENST00000483922 PPP2R2CQ9Y2T4 447 aa11.68□□□□□ -0.54
UBR4-213ENST00000483922 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
UBR4-213ENST00000483922 CAPN14A8MX76 684 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 E7ESA3 106 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 UBXN8O00124 270 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PLOD2O00469 737 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PPM1BO75688 479 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 CGAP01215 116 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PIK3CBP42338 1070 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 KIR2DL2P43627 348 aaPredicted RBP11.67□□□□□ -0.54
UBR4-213ENST00000483922 PTH2RP49190 550 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 DUSP2Q05923 314 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 CBLBQ13191 982 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 SETDB1Q15047 1291 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 NNATQ16517 81 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 FAM111BQ6SJ93 734 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 LRRC70Q7Z2Q7 622 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 ZNF550Q7Z398 422 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 EXT2Q93063 718 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 ATOH8Q96SQ7 321 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 CCL19Q99731 98 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PELOQ9BRX2 385 aaKnown RBP11.67□□□□□ -0.54
UBR4-213ENST00000483922 GSX2Q9BZM3 304 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PIGMQ9H3S5 423 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 ALG9Q9H6U8 611 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
UBR4-213ENST00000483922 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 ZNF639Q9UID6 485 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 PACSIN3Q9UKS6 424 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 CES1P1Q9UKY3 287 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
UBR4-213ENST00000483922 H0Y3Z8 333 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 H0YC42 278 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 K7EPI3 171 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 MSTNO14793 375 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 HCRTR2O43614 444 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 ZIC3O60481 467 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 UGT2B11O75310 529 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 NME6O75414 186 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 SOX30O94993 753 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 THBDP07204 575 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 CTAGE8P0CG41 777 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 NR2F6P10588 404 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 ZNF708P17019 499 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 NAGAP17050 411 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 TLX1P31314 330 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 CPOXP36551 454 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 BUD31P41223 144 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 NR1H2P55055 460 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 TPD52P55327 224 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 ATP6V0D1P61421 351 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 PDIA2Q13087 525 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms