RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 DR1Q01658 176 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 SRYQ05066 204 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 BIKQ13323 160 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 FRG1Q14331 258 aaKnown RBP9.42□□□□□ -0.9
DDX39B-220ENST00000482195 SLMAPQ14BN4 828 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 TBCCQ15814 346 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 NNATQ16517 81 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 SPRED3Q2MJR0 410 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 KBTBD12Q3ZCT8 623 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 POMZP3Q6PJE2 187 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 RAPH1Q70E73 1250 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 C9orf106Q8NAJ2 232 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 OR7G3Q8NG95 312 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 HUS1BQ8NHY5 278 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 SPPL2AQ8TCT8 520 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 CDKL2Q92772 493 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 GNRHR2Q96P88 292 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 MTERF1Q99551 399 aaKnown RBP9.42□□□□□ -0.9
DDX39B-220ENST00000482195 CD244Q9BZW8 370 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 METTL7AQ9H8H3 244 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 WDR41Q9HAD4 459 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 LYARQ9NX58 379 aaKnown RBP9.42□□□□□ -0.9
DDX39B-220ENST00000482195 GALNT8Q9NY28 637 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 NUDT4Q9NZJ9 180 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 PTBP2Q9UKA9 531 aaKnown RBP9.42□□□□□ -0.9
DDX39B-220ENST00000482195 EIF3LQ9Y262 564 aaKnown RBP9.42□□□□□ -0.9
DDX39B-220ENST00000482195 DSCAMO60469 2012 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 HEATR5AQ86XA9 2040 aa9.42□□□□□ -0.9
DDX39B-220ENST00000482195 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MBD3L4A6NDZ8 208 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MBD3L3A6NE82 208 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MBD3L5A6NJ08 208 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CD8B2A6NJW9 211 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 FAM171A2A8MVW0 826 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 UBXN8O00124 270 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 PLPP1O14494 284 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CASKO14936 926 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 ARHGEF9O43307 516 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SMPD2O60906 423 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SNX4O95219 450 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 GOSR1O95249 250 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 GPR75O95800 540 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 AIFM1O95831 613 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 HRGP04196 525 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 HPNP05981 417 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CD53P19397 219 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CD33P20138 364 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 IVDP26440 423 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 HOXC12P31275 282 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 GMPRP36959 345 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 ARL1P40616 181 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CASP2P42575 452 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 RPS13P62277 151 aaKnown RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 CDKL4Q5MAI5 379 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 DEPDC1Q5TB30 811 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SHEQ5VZ18 495 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 VASNQ6EMK4 673 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 GRHL2Q6ISB3 625 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 PLXDC2Q6UX71 529 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 ANGPTL8Q6UXH0 198 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 LAS2Q8IYD9 372 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 GCNT2Q8N0V5 402 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 FAM83FQ8NEG4 500 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 OR1J4Q8NGS1 313 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MBD3L2Q8NHZ7 208 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 RDH11Q8TC12 318 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-220ENST00000482195 WDYHV1Q96HA8 205 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SMYD2Q9NRG4 433 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MOCS1Q9NZB8 636 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 KLRF1Q9NZS2 232 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 SNX12Q9UMY4 172 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 MAPRE3Q9UPY8 281 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 NPFFR2Q9Y5X5 522 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
DDX39B-220ENST00000482195 FBN3Q75N90 2809 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 WASHC1A8K0Z3 465 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 H7C1Q1 480 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 K7EPI3 171 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 EEDO75530 441 aaKnown RBP9.4□□□□□ -0.9
DDX39B-220ENST00000482195 SEC31AO94979 1220 aaKnown RBP9.4□□□□□ -0.9
DDX39B-220ENST00000482195 WISP3O95389 354 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-220ENST00000482195 LY6G6DO95868 133 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 IL18BPO95998 194 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 GBAP04062 536 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 CLPSP04118 112 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 NT5EP21589 574 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 TCEA1P23193 301 aaKnown RBP9.4□□□□□ -0.9
DDX39B-220ENST00000482195 PIK3R1P27986 724 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 CASP3P42574 277 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 RAB10P61026 200 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 ILF2Q12905 390 aaKnown RBP9.4□□□□□ -0.9
DDX39B-220ENST00000482195 FOXF2Q12947 444 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 OR52E8Q6IFG1 317 aa9.4□□□□□ -0.9
DDX39B-220ENST00000482195 NUDT13Q86X67 352 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms