RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 GRTP1Q5TC63 336 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 UBE2UQ5VVX9 321 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TTC23Q5W5X9 447 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 C18orf63Q68DL7 685 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 GFRALQ6UXV0 394 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 HACD2Q6Y1H2 254 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 LUZP2Q86TE4 346 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TMEM219Q86XT9 240 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 STX12Q86Y82 276 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 ERO1BQ86YB8 467 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 RAB43Q86YS6 212 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 STX19Q8N4C7 294 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 FNDC5Q8NAU1 212 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 KCNH5Q8NCM2 988 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 OR5T2Q8NGG2 359 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 BBS10Q8TAM1 723 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TFB1MQ8WVM0 346 aaKnown RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 DNAJA4Q8WW22 397 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 DNAJC19Q96DA6 116 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 PDXPQ96GD0 296 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 CENPNQ96H22 339 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 SORT1Q99523 831 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 KCTD14Q9BQ13 255 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 APOL6Q9BWW8 343 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 WDR41Q9HAD4 459 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TUFT1Q9NNX1 390 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 SMPD3Q9NY59 655 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.3□□□□□ -1.72
SSR1-207ENST00000479485 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 MAD2L2Q9UI95 211 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TEKT2Q9UIF3 430 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 KLHL21Q9UJP4 597 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 PEX16Q9Y5Y5 336 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 TRIP12Q14669 1992 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 PSME4Q14997 1843 aa4.3□□□□□ -1.72
SSR1-207ENST00000479485 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
SSR1-207ENST00000479485 TRPM3Q9HCF6 1732 aaPredicted RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 KIF1AQ12756 1690 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 IGHV4OR15-8A0A075B7B6 117 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 A0A0B4J203 849 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 LINC00862A6NCI5 91 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 OR6C65A6NJZ3 312 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 CDRT15L2A8MXV6 281 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 TRIM49D1C9J1S8 452 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 TOR1AO14656 332 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 AIM2O14862 343 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ANKRD28O15084 1053 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 SMAD9O15198 467 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 KCNN4O15554 427 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 PLPP2O43688 288 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 GATCO43716 136 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 BCAS1O75363 584 aaPredicted RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 PDE9AO76083 593 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 PROSCO94903 275 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 CDK14O94921 469 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 VAPBO95292 243 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 HPRP00739 348 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 APOC1P02654 83 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 HIST1H2ABP04908 130 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 CALB1P05937 261 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 APOA4P06727 396 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 SNRNP70P08621 437 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 PLA2G4BP0C869 781 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 SLC2A3P11169 496 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 RALAP11233 206 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ALOX12P18054 663 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 XRCC1P18887 633 aaPredicted RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 RAB3AP20336 220 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 HIST1H2ADP20671 130 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 C4BPBP20851 252 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 HAAOP46952 286 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 MARCKSL1P49006 195 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ERFP50548 548 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 NDST1P52848 882 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 MAPK12P53778 367 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 NAPAP54920 295 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ABCE1P61221 599 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 ISL1P61371 349 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 VBP1P61758 197 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 SNRPFP62306 86 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 AIMP2Q13155 320 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 IL18R1Q13478 541 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ALCAMQ13740 583 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ATP6AP1Q15904 470 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 UGP2Q16851 508 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ARMCX4Q5H9R4 360 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 LCN10Q6JVE6 187 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 ZNF790Q6PG37 636 aa4.29□□□□□ -1.72
SSR1-207ENST00000479485 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
SSR1-207ENST00000479485 EPGNQ6UW88 154 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms