RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	ANKRD33B	A6NCL7	494 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	BCKDK	O14874	412 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	IL3	P08700	152 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	ANXA4	P09525	319 aa	Predicted RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	GPX3	P22352	226 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	GRN	P28799	593 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	MAN2A2	P49641	1150 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	FOXA1	P55317	472 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	RPP38	P78345	283 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	SLC18A2	Q05940	514 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	MGAT2	Q10469	447 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	EXOSC7	Q15024	291 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	GXYLT1	Q4G148	440 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	LIPM	Q5VYY2	423 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	FAM180B	Q6P0A1	224 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	GALNT18	Q6P9A2	607 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	TRIL	Q7L0X0	811 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	CCDC116	Q8IYX3	515 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	C4orf33	Q8N1A6	199 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	DIO2	Q92813	273 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	CTHRC1	Q96CG8	243 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	C11orf24	Q96F05	449 aa	Predicted RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	JSRP1	Q96MG2	331 aa	Predicted RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	SMC6	Q96SB8	1091 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	SECISBP2	Q96T21	854 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	EBPL	Q9BY08	206 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	IQCG	Q9H095	443 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	C12orf65	Q9H3J6	166 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	EXO5	Q9H790	373 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	PROK2	Q9HC23	129 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	GIMAP4	Q9NUV9	329 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	SIRT5	Q9NXA8	310 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	QPCTL	Q9NXS2	382 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	CNOT11	Q9UKZ1	510 aa	Known RBP	12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	HRH3	Q9Y5N1	445 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	CELSR2	Q9HCU4	2923 aa		12.69	□□□□□ -0.38
HDAC7-222	ENST00000477937	TRGV5	A0A0B4J1U4	118 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	AQP7	O14520	342 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	HCN1	O60741	890 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	BCAS2	O75934	225 aa	Predicted RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	LRAT	O95237	230 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	NUDT17	P0C025	328 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	UROS	P10746	265 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	PCSK2	P16519	638 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	NAGA	P17050	411 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	ABCD3	P28288	659 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	FBXW4	P57775	412 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	DCAF7	P61962	342 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	VSNL1	P62760	191 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	DUSP2	Q05923	314 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	IFFO1	Q0D2I5	559 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	ZNF763	Q0D2J5	394 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	LTB4R	Q15722	352 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	TRMT12	Q53H54	448 aa	Known RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	EMC4	Q5J8M3	183 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	TRIM46	Q7Z4K8	759 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	RIBC1	Q8N443	379 aa	Predicted RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	OR2W6P	Q8NHA6	318 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	SPPL2A	Q8TCT8	520 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	CA5BP1	Q8WTZ4	195 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	RND1	Q92730	232 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	EXOSC8	Q96B26	276 aa	Known RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	SARAF	Q96BY9	339 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	SDCCAG3	Q96C92	435 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	HSPBAP1	Q96EW2	488 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	LCOR	Q96JN0	433 aa	Predicted RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	NXF5	Q9H1B4	397 aa	Known RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	B4GALT7	Q9UBV7	327 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	PRODH2	Q9UF12	536 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	ACAD8	Q9UKU7	415 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	DTX4	Q9Y2E6	619 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	LIPG	Q9Y5X9	500 aa		12.68	□□□□□ -0.38
HDAC7-222	ENST00000477937	HCFC1	P51610	2035 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	UNC79	Q9P2D8	2635 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	FIGNL2	A6NMB9	653 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	ACOX3	O15254	700 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	TRIM3	O75382	744 aa	Predicted RBP	12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	PPM1B	O75688	479 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	SNX4	O95219	450 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	CBX7	O95931	251 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	ABCB1	P08183	1280 aa	Predicted RBP	12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	CELA3A	P09093	270 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	RFPL3S	P0C7P2	107 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	MPI	P34949	423 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	SOX18	P35713	384 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	EMD	P50402	254 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	MRPS35	P82673	323 aa	Known RBP	12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	C2orf80	Q0P641	193 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	PMPCA	Q10713	525 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	CDSN	Q15517	529 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	WLS	Q5T9L3	541 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	ZNF585A	Q6P3V2	769 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	ACAD11	Q709F0	780 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	PACS2	Q86VP3	889 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	PRR22	Q8IZ63	422 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	SIMC1	Q8NDZ2	872 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	OR52R1	Q8NGF1	315 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	OR5M9	Q8NGP3	310 aa		12.67	□□□□□ -0.38
HDAC7-222	ENST00000477937	FAM76A	Q8TAV0	307 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms