RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FUT7Q11130 342 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 KBTBD12Q3ZCT8 623 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 DEPDC1Q5TB30 811 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 MED27Q6P2C8 311 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 VWA1Q6PCB0 445 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 ZNF474Q6S9Z5 364 aaPredicted RBP18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 IFNEQ86WN2 208 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 ZNF615Q8N8J6 731 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 CFAP36Q96G28 342 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 OSBPL11Q9BXB4 747 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 ACTR8Q9H981 624 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 PRM3Q9NNZ6 103 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 ADGRE2Q9UHX3 823 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 RNF112Q9ULX5 631 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 PLPP1O14494 284 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 TGM6O95932 706 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 NR2F6P10588 404 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 KRT15P19012 456 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 ATP5J2P56134 94 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 CLDN18P56856 261 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 SULT1C3Q6IMI6 304 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 SLC30A6Q6NXT4 461 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 ZNF550Q7Z398 422 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 GPSM1Q86YR5 675 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 GALNT12Q8IXK2 581 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 PDPRQ8NCN5 879 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 OR7G3Q8NG95 312 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 CAVIN3Q969G5 261 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 RGMAQ96B86 450 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 GALNT9Q9HCQ5 603 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 ELOVL5Q9NYP7 299 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 MAPRE3Q9UPY8 281 aa18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 EXO1Q9UQ84 846 aaKnown RBP18.34■□□□□ 0.53
PDLIM1-202ENST00000477757 GLOD5A6NK44 160 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 WASHC1A8K0Z3 465 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 PPM1BO75688 479 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 POU2F1P14859 743 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF708P17019 499 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 NAGAP17050 411 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 PTGDSP41222 190 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 SNTA1Q13424 505 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 STEAP4Q687X5 459 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 OR2A2Q6IF42 318 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 LRRC70Q7Z2Q7 622 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 HIPK1Q86Z02 1210 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 CNEP1R1Q8N9A8 125 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 TRIM58Q8NG06 486 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 HGDQ93099 445 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 CENPKQ9BS16 269 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF717Q9BY31 904 aaPredicted RBP18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 OPN3Q9H1Y3 402 aaPredicted RBP18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 OR10A5Q9H207 317 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 LYARQ9NX58 379 aaKnown RBP18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 TAS2R10Q9NYW0 307 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 CHMP2BQ9UQN3 213 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 ASB4Q9Y574 426 aa18.33■□□□□ 0.52
PDLIM1-202ENST00000477757 HEATR5AQ86XA9 2040 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 A0A1W2PR48 441 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 A0A1W2PS29 197 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 LRRC14BA6NHZ5 514 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 RNF223E7ERA6 249 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 C16orf97H3BN30 126 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 TLX2O43763 284 aaPredicted RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 CCNT2O60583 730 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 ICOSLGO75144 302 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 CBR3O75828 277 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 WISP3O95389 354 aaPredicted RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 CT62P0C5K7 136 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 GPX3P22352 226 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 STARP49675 285 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 ARFIP1P53367 373 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 NR1H2P55055 460 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 FRG1Q14331 258 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 MRM1Q6IN84 353 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 AAGABQ6PD74 315 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 BTLAQ7Z6A9 289 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 MAPK1IP1LQ8NDC0 245 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 GRK7Q8WTQ7 553 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 ZC3HAV1LQ96H79 300 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 NODALQ96S42 347 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 SLC39A3Q9BRY0 314 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 NXF5Q9H1B4 397 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 LZTFL1Q9NQ48 299 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 PTBP2Q9UKA9 531 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 ABCA1O95477 2261 aa18.32■□□□□ 0.52
PDLIM1-202ENST00000477757 A0A0A6YYD5 115 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 DNALI1O14645 258 aaPredicted RBP18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 AIFM1O95831 613 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 ELK3P41970 407 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 FNTAP49354 379 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 DDX39BQ13838 428 aaKnown RBP18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 OR4D1Q15615 310 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 OR52E8Q6IFG1 317 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF704Q6ZNC4 412 aaPredicted RBP18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 C22orf34Q6ZV56 151 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 P4HA3Q7Z4N8 544 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 RNF175Q8N4F7 328 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 WDSUB1Q8N9V3 476 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 HUS1BQ8NHY5 278 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms