RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 AICDAQ9GZX7 198 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 PRDM7Q9NQW5 492 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 MMP17Q9ULZ9 603 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 SCML1Q9UN30 329 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 ASB4Q9Y574 426 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 HEBP2Q9Y5Z4 205 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 A0A0G2JN53 185 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 A0A0G2JPF8 293 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 PRAMEF27A3QJZ7 478 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 ISPDA4D126 451 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 SAGE2PA6NJ88 616 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 HNRNPCL2B2RXH8 293 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 HNRNPCL3B7ZW38 293 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 LATO43561 262 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 HNRNPCL4P0DMR1 293 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 TGFBR1P36897 503 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 RHAGQ02094 409 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 SZRD1Q7Z422 152 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 NLGN4XQ8N0W4 816 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 OR56A1Q8NGH5 318 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 OR4D11Q8NGI4 311 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 UCN3Q969E3 161 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 CDX2Q99626 313 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-208ENST00000476724 FNDC11Q9BVV2 318 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 KLHL31Q9H511 634 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 SLC6A14Q9UN76 642 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 A4GNTQ9UNA3 340 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 CA5BQ9Y2D0 317 aa15.51■□□□□ 0.07
TMEM53-208ENST00000476724 RPL36Q9Y3U8 105 aaKnown RBP15.51■□□□□ 0.07
TMEM53-208ENST00000476724 M0R129 80 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 CCRL2O00421 344 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 CASC3O15234 703 aaKnown RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ERI3O43414 337 aaKnown RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SRFP11831 508 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 CMPK1P30085 196 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 IFITM3Q01628 133 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ZNF45Q02386 682 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 HYAL2Q12891 473 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 TARDBPQ13148 414 aaKnown RBP eCLIP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 MED22Q15528 200 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 OCLNQ16625 522 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 LEXMQ3ZCV2 418 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 PERM1Q5SV97 790 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 RNLSQ5VYX0 342 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 USP30Q70CQ3 517 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ACOT4Q8N9L9 421 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 OR2L3Q8NG85 312 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SUN3Q8TAQ9 357 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SLC7A13Q8TCU3 470 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 KLHL6Q8WZ60 621 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 NR4A3Q92570 626 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SLC6A20Q9NP91 592 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 MKLN1Q9UL63 735 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 NCKAP1Q9Y2A7 1128 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 PLEKHM1Q9Y4G2 1056 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 GPSM3Q9Y4H4 160 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 COLEC10Q9Y6Z7 277 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 DNAH14Q0VDD8 3507 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 PDZK1P1A8MUH7 402 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 FAM227AF5H4B4 570 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 H3BN98 237 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SCAMP1O15126 338 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 PPM1DO15297 605 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ENTPD6O75354 484 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 LGI1O95970 557 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 HSMCR30P0CW71 290 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 GLULP15104 373 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 TGM1P22735 817 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ATP5A1P25705 553 aaKnown RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 CSTF2P33240 577 aaKnown RBP eCLIP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 S100A5P33763 92 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 TPMTP51580 245 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 CLDN2P57739 230 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 FOXD4Q12950 439 aaPredicted RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 TDGQ13569 410 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 RBM45Q8IUH3 476 aaKnown RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 OR5D16Q8NGK9 328 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
TMEM53-208ENST00000476724 HMGB4Q8WW32 186 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 HLA-CQ95604 372 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 APOOQ9BUR5 198 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 OR51E2Q9H255 320 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 KIR3DX1Q9H7L2 352 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SLC2A4RGQ9NR83 387 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 C2orf42Q9NWW7 574 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 SNX7Q9UNH6 387 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 ENTPD4Q9Y227 616 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 UGT2A1Q9Y4X1 527 aa15.5■□□□□ 0.07
TMEM53-208ENST00000476724 LOC100506127A0A0U1RQW1 187 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 A0A1W2PR48 441 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 POM121BA6NF01 834 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 AGAP5A6NIR3 686 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 NME6O75414 186 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-208ENST00000476724 ERAL1O75616 437 aaKnown RBP15.49■□□□□ 0.07
TMEM53-208ENST00000476724 FHP07954 510 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 DBTP11182 482 aaKnown RBP15.49■□□□□ 0.07
TMEM53-208ENST00000476724 IL9P15248 144 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 CSNK2A2P19784 350 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-208ENST00000476724 GRK5P34947 590 aa15.49■□□□□ 0.07
TMEM53-208ENST00000476724 SOX6P35712 828 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms