RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OTUB1Q96FW1 271 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 PWWP2AQ96N64 755 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 WFIKKN1Q96NZ8 548 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PANX3Q96QZ0 392 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM43Q9BTV4 400 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SRRQ9GZT4 340 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 C1orf198Q9H425 327 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 GAREM1Q9H706 876 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM138Q9NPI0 162 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM216Q9P0N5 145 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 GHRLQ9UBU3 117 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MRTO4Q9UKD2 239 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 CLEC4EQ9ULY5 219 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MYRFQ9Y2G1 1151 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MAP3K1Q13233 1512 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ADGRA2Q96PE1 1338 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MED14O60244 1454 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SHANK2Q9UPX8 1470 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SETD1AO15047 1707 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 IGLON5A6NGN9 336 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MANSC4A6NHS7 340 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 FAM90A20PA6NIJ5 464 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 AZIN1O14977 448 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PHGDHO43175 533 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 SSX4O60224 188 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CST4P01036 141 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IFNA5P01569 189 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NR3C1P04150 777 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ICAM1P05362 532 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CD48P09326 243 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SMIM10L1P0DMW3 83 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 HLA-GP17693 338 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PTPRAP18433 802 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NR1D1P20393 614 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ASPAP45381 313 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IDH2P48735 452 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 PDLIM4P50479 330 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MAXP61244 160 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 YWHAGP61981 247 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBR3-208ENST00000474426 ADARB1P78563 741 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 GRAPQ13588 217 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IL10RAQ13651 578 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NFATC4Q14934 902 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM177Q53S58 311 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC22A10Q63ZE4 541 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PODNL1Q6PEZ8 512 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 UGT2A3Q6UWM9 527 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KYAT3Q6YP21 454 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 DPY19L3Q6ZPD9 716 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM135Q86UB9 458 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 WDFY1Q8IWB7 410 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SIRT6Q8N6T7 355 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 HSD17B11Q8NBQ5 300 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FBXL13Q8NEE6 735 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PROKR2Q8NFJ6 384 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR56A3Q8NH54 315 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SMIM10Q96HG1 83 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR2V2Q96R30 315 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CHRDL1Q9BU40 450 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TSSK1BQ9BXA7 367 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NEUROG2Q9H2A3 272 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SMOXQ9NWM0 555 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CCDC59Q9P031 241 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC25A10Q9UBX3 287 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR52A1Q9UKL2 312 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ELF5Q9UKW6 265 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZNF214Q9UL59 606 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC22A13Q9Y226 551 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MRPS33Q9Y291 106 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 PCDHB7Q9Y5E2 793 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 HCFC2Q9Y5Z7 792 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KPTNQ9Y664 436 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CIB4A0PJX0 185 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NKX6-3A6NJ46 265 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 H3BN98 237 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 I3L4J1 428 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 AGRPO00253 132 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 RGS10O43665 173 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 UBOX5O94941 541 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC34A2O95436 690 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FGGP02679 453 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SELPP16109 830 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SMPD1P17405 629 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZP3P21754 424 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ITGA3P26006 1051 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DPP4P27487 766 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DDTP30046 118 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 GRIA1P42261 906 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SRP9P49458 86 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 NOVA1P51513 510 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 SEC61GP60059 68 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 RAP1BP61224 184 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SCAPQ12770 1279 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM92Q6UXU6 159 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PIWIL4Q7Z3Z4 852 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 FAM219AQ8IW50 185 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CCDC60Q8IWA6 550 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC44A3Q8N4M1 653 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CLDN22Q8N7P3 220 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR5D13Q8NGL4 314 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms