RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 OR5B17Q8NGF7 314 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 GRPEL2Q8TAA5 225 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PYROXD1Q8WU10 500 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PTPMT1Q8WUK0 201 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ASB5Q8WWX0 329 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC38A4Q969I6 547 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 KLHL29Q96CT2 875 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 FOXRED1Q96CU9 486 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 WFIKKN1Q96NZ8 548 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PANX3Q96QZ0 392 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 OR5B2Q96R09 309 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PRMT1Q99873 361 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC30A2Q9BRI3 323 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 UTP23Q9BRU9 249 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 C2orf88Q9BSF0 95 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 STRADBQ9C0K7 418 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SRRQ9GZT4 340 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 OR2AG1Q9H205 316 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 HRH4Q9H3N8 390 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SRD5A3Q9H8P0 318 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 WDR76Q9H967 626 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 MKKSQ9NPJ1 570 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 DNAJB12Q9NXW2 375 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 MGAT4AQ9UM21 535 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 MROH7Q68CQ1 1323 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 A0A1B0GV90 55 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 A0A1W2PQL4 384 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SH2D7A6NKC9 451 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ANKRD66B4E2M5 251 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 C9JVG2 144 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TMEM189-UBE2V1I3L0A0 370 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TFECO14948 347 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SELENOFO60613 162 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PRAMEF2O60811 474 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 UPK3AO75631 287 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ICAM1P05362 532 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CDH1P12830 882 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PNLIPP16233 465 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 AMPD1P23109 780 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 GLRA1P23415 457 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ACKR3P25106 362 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CSF2RBP32927 897 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 RCVRNP35243 200 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SOX18P35713 384 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 AHRP35869 848 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 GPX4P36969 197 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 LGALS4P56470 323 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 MLF1P58340 268 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PTENP60484 403 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ESRRGP62508 458 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 RBX1P62877 108 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CCZ1BP86790 482 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CCZ1P86791 482 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 DEFA6Q01524 100 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 GABPAQ06546 454 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TFDP1Q14186 410 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC29A2Q14542 456 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TRAM2Q15035 370 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC9A3R2Q15599 337 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 AKIRIN2Q53H80 203 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 KRT39Q6A163 491 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NIPAL1Q6NVV3 410 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TMEM26Q6ZUK4 368 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TDRPQ86YL5 185 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NPAS3Q8IXF0 933 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF100Q8IYN0 542 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ZFP82Q8N141 532 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 GTPBP8Q8N3Z3 284 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 BCORP1Q8N888 145 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TERB1Q8NA31 727 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NECAP1Q8NC96 275 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CATSPER1Q8NEC5 780 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PROKR2Q8NFJ6 384 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 DNERQ8NFT8 737 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SMPDL3BQ92485 455 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ST6GALNAC6Q969X2 333 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ARSGQ96EG1 525 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SEPT5Q99719 369 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NPAS1Q99742 590 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 EBNA1BP2Q99848 306 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 KLHDC3Q9BQ90 382 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NEURL2Q9BR09 285 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 MSTO1Q9BUK6 570 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 IPPKQ9H8X2 491 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 KCNMB3Q9NPA1 279 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 DDX19AQ9NUU7 478 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 SDHAF2Q9NX18 166 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 TEX10Q9NXF1 929 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 RHCGQ9UBD6 479 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 IKZF3Q9UKT9 509 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 ACSL6Q9UKU0 697 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 NDRG2Q9UN36 371 aaKnown RBP5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 FLVCR2Q9UPI3 526 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 WASF3Q9UPY6 502 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 CNTN6Q9UQ52 1028 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 PPP1R3CQ9UQK1 317 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms