RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 RGMAQ96B86 450 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 LINC00615Q96LM1 132 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 RDH12Q96NR8 316 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 COQ7Q99807 217 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 GLIPR2Q9H4G4 154 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 SEMA3GQ9NS98 782 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 STARD5Q9NSY2 213 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ACER3Q9NUN7 267 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 MS4A12Q9NXJ0 267 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 GDE1Q9NZC3 331 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ANGPT4Q9Y264 503 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ABCA7Q8IZY2 2146 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 SMIM30A4D0T7 59 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 CLDN24A6NM45 220 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 CDK2AP1O14519 115 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 CCNKO75909 580 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 DLGAP3O95886 979 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 SEMG1P04279 462 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 CKMT1AP12532 417 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 PPIBP23284 216 aaKnown RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 CNR2P34972 360 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 LIPAP38571 399 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 PIK3CBP42338 1070 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 RAB28P51157 221 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 PRDX1Q06830 199 aaKnown RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 HYAL1Q12794 435 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 C1orf61Q13536 156 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 PTGES3Q15185 160 aaKnown RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 MED22Q15528 200 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 TOR1AIP1Q5JTV8 583 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 OR4C11Q6IEV9 310 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 REEP3Q6NUK4 255 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF765Q7L2R6 523 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 STX19Q8N4C7 294 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 TP53I13Q8NBR0 393 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 GPR32P1Q8NGA4 272 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 PSMA8Q8TAA3 256 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 MUL1Q969V5 352 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 MENTQ9BUN1 341 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 MCOLN1Q9GZU1 580 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 NMNAT1Q9HAN9 279 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ZBTB20Q9HC78 741 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-203ENST00000469739 ICKQ9UPZ9 632 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 NTNG1Q9Y2I2 539 aa8.91□□□□□ -0.98
TOP3A-203ENST00000469739 HMGN4O00479 90 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ADAMDEC1O15204 470 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 HMGN2P05204 90 aaKnown RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 IL1RNP18510 177 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 RYKP34925 604 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 PDE7AQ13946 482 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 CTF1Q16619 201 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF605Q86T29 641 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ADCK1Q86TW2 530 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 P2RY8Q86VZ1 359 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 LSM14AQ8ND56 463 aaKnown RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ANGPTL6Q8NI99 470 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 SETD7Q8WTS6 366 aaKnown RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 OR1E3Q8WZA6 343 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 OTULINQ96BN8 352 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 SIPA1Q96FS4 1042 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 TREX2Q9BQ50 279 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 CHCHD6Q9BRQ6 235 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 MVB12BQ9H7P6 319 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 SLC6A20Q9NP91 592 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ACOT13Q9NPJ3 140 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 FBXO8Q9NRD0 319 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 TMEM74BQ9NUR3 256 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 CORO2BQ9UQ03 480 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 UGT2A1Q9Y4X1 527 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 A0A1W2PR48 441 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 LRIT2A6NDA9 550 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 KCNK2O95069 426 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 RPN2P04844 631 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ASGR2P07307 311 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 POU2F2P09086 479 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ITGAMP11215 1152 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 POLR2CP19387 275 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 UQCRC2P22695 453 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 GRK3P35626 688 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ST13P50502 369 aaKnown RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ADPRHP54922 357 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 SIM1P81133 766 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 MRPS15P82914 257 aaKnown RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 FCHO2Q0JRZ9 810 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ST3GAL4Q11206 333 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 MAP4K2Q12851 820 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 TARDBPQ13148 414 aaKnown RBP eCLIP8.9□□□□□ -0.981e-9■■■■■ 37.6
TOP3A-203ENST00000469739 MICAQ29983 383 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 CDONQ4KMG0 1287 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 DEFB134Q4QY38 66 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF776Q68DI1 518 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 PTCHD4Q6ZW05 846 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 PAGE2Q7Z2X7 111 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 TSPYL5Q86VY4 417 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-203ENST00000469739 ACOT4Q8N9L9 421 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 IL17RCQ8NAC3 791 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 OR9A2Q8NGT5 310 aa8.9□□□□□ -0.98
TOP3A-203ENST00000469739 HMGB4Q8WW32 186 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms