RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ALDH9A1P49189 494 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACSM2AQ08AH3 577 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 CDSNQ15517 529 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 PRICKLE4Q2TBC4 344 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 CCDC153Q494R4 210 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 TMEM198Q66K66 360 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACSM2BQ68CK6 577 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 TDRPQ86YL5 185 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 MARVELD2Q8N4S9 558 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 CCNYL1Q8N7R7 359 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 OR5M3Q8NGP4 307 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 OR2W6PQ8NHA6 318 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 DIO2Q92813 273 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF597Q96LX8 424 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACPTQ9BZG2 426 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 BRINP2Q9C0B6 783 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 EXO5Q9H790 373 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 PROK2Q9HC23 129 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACKR4Q9NPB9 350 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 PNPLA3Q9NST1 481 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACAD8Q9UKU7 415 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 LIPGQ9Y5X9 500 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 PDZD2O15018 2839 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 TRGV5A0A0B4J1U4 118 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GNG14A0A1W2PPG7 69 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 SERTM1A2A2V5 107 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 PCDH7O60245 1069 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 WDR1O75083 606 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 CDH16O75309 829 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 HOXD4P09016 255 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-207ENST00000467985 CELA3AP09093 270 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GPX3P22352 226 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GSTM5P46439 218 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 MGAT2Q10469 447 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 HEPACAMQ14CZ8 416 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 WLSQ5T9L3 541 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GALNT18Q6P9A2 607 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 ZYG11AQ6WRX3 759 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 OR5M9Q8NGP3 310 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 RDH11Q8TC12 318 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 EPS8L3Q8TE67 593 aaKnown RBP17.53■□□□□ 0.4
COL7A1-207ENST00000467985 CTHRC1Q96CG8 243 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 ERP27Q96DN0 273 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 SPOCK3Q9BQ16 436 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 SHCBP1LQ9BZQ2 653 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GSTO2Q9H4Y5 243 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 BCAP29Q9UHQ4 241 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF639Q9UID6 485 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 UTS2RQ9UKP6 389 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 EMCNQ9ULC0 261 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 GRID1Q9ULK0 1009 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 DLGAP4Q9Y2H0 992 aa17.53■□□□□ 0.4
COL7A1-207ENST00000467985 PHF3Q92576 2039 aaKnown RBP17.53■□□□□ 0.4
COL7A1-207ENST00000467985 A0A1W2PPM1 405 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 LRRC3CA6NJW4 275 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ENO4A6NNW6 628 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 G3V2L1 256 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ACOX3O15254 700 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 TRIM3O75382 744 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-207ENST00000467985 BCAS2O75934 225 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-207ENST00000467985 RFPL3SP0C7P2 107 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ABCD3P28288 659 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 CRHR1P34998 444 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 FBXW4P57775 412 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 DCAF7P61962 342 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 PMPCAQ10713 525 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 CASP8Q14790 479 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 KRT71Q3SY84 523 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF585AQ6P3V2 769 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 TMEM64Q6YI46 380 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 B3GNT6Q6ZMB0 384 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 SH2D5Q6ZV89 423 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 HDXQ7Z353 690 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 PACS2Q86VP3 889 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 LURAP1LQ8IV03 231 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 MMP21Q8N119 569 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 LILRB4Q8NHJ6 448 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 SPPL2AQ8TCT8 520 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 HSPBAP1Q96EW2 488 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 CNRIP1Q96F85 164 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-207ENST00000467985 JSRP1Q96MG2 331 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF681Q96N22 645 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 RILPQ96NA2 401 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 ANGPTL4Q9BY76 406 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 MID1IP1Q9NPA3 183 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 GIMAP4Q9NUV9 329 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 SIRT5Q9NXA8 310 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 PRODH2Q9UF12 536 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 RNF6Q9Y252 685 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 PCDHGB3Q9Y5G1 929 aa17.52■□□□□ 0.4
COL7A1-207ENST00000467985 FAM47E-STBD1D6RA91 191 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 C19orf84I3L1E1 186 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 PROCP04070 461 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 SNRPB2P08579 225 aaKnown RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 IL3P08700 152 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 CHN1P15882 459 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 TIA1P31483 386 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 HTR6P50406 440 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 DNAJB13P59910 316 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms