RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SP9P0CG40 484 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 GOLGA8HP0CJ92 632 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 HSPD1P10809 573 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 PDHBP11177 359 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 TOP1P11387 765 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 F3P13726 295 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 CD59P13987 128 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 ACAT1P24752 427 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 PSMA3P25788 255 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 CD52P31358 61 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 SFTPDP35247 375 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 MRPS6P82932 125 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 RBP5P82980 135 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 SP4Q02446 784 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 CACNG1Q06432 222 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 SCARB2Q14108 478 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 C3AR1Q16581 482 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 MPP7Q5T2T1 576 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 HECTD3Q5T447 861 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 TMEM184AQ6ZMB5 413 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 SPATA19Q7Z5L4 167 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 CCDC60Q8IWA6 550 aaPredicted RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 PHC2Q8IXK0 858 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 COLGALT1Q8NBJ5 622 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 OR4C15Q8NGM1 316 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 GOT1L1Q8NHS2 421 aaPredicted RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 DEPDC1BQ8WUY9 529 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 DNAJB3Q8WWF6 145 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 SEPT1Q8WYJ6 367 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 PYCR2Q96C36 320 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 PGM2Q96G03 612 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 CHCHD5Q9BSY4 110 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 THUMPD3Q9BV44 507 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 GTPBP2Q9BX10 602 aaKnown RBP2.69□□□□□ -1.98
XRN1-206ENST00000467077 FTHL17Q9BXU8 183 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 VAT1LQ9HCJ6 419 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 PXMP2Q9NR77 195 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 NLGN3Q9NZ94 848 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 IL36AQ9UHA7 158 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 BAHCC1Q9P281 2608 aa2.69□□□□□ -1.98
XRN1-206ENST00000467077 BPTFQ12830 3046 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ABCB11O95342 1321 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 NRCAMQ92823 1304 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 GREB1Q4ZG55 1949 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 IGLV4-3A0A075B6K6 122 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 A0A087WZ39 114 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 IGHV3-20A0A0C4DH32 117 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 IGHV3-38A0A0C4DH36 116 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 SHISA9B4DS77 424 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 FAM86B1E9PN63 330 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 CXCL14O95715 111 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ZFYP08048 801 aaPredicted RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 FAM86B2P0C5J1 330 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 FAM58BPP0C7Q3 252 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ADRA2CP18825 462 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 EDNRAP25101 427 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 CCND2P30279 289 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 NAGLUP54802 743 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 MGAT3Q09327 533 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 BFSP1Q12934 665 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 SMC1AQ14683 1233 aaKnown RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 CDC37Q16543 378 aaPredicted RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 RBBP7Q16576 425 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 DUSP5Q16690 384 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 UGCGQ16739 394 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 FGD3Q5JSP0 725 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ATP1A1-AS1Q5TC04 95 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 FAM91A1Q658Y4 838 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 OLFML2AQ68BL7 652 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 PRSS55Q6UWB4 352 aaPredicted RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 PET117Q6UWS5 81 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ENPP7Q6UWV6 458 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 SPATA21Q7Z572 469 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 OR8H3Q8N146 312 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 MRPL43Q8N983 215 aaKnown RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 INTS14Q96SY0 518 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ATF6BQ99941 703 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 CITED2Q99967 270 aaPredicted RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 RIMS4Q9H426 269 aaPredicted RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 CWH43Q9H720 699 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 GTSE1Q9NYZ3 720 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 PKD2L2Q9NZM6 624 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 PILRBQ9UKJ0 227 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 GTF3C4Q9UKN8 822 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 ANGPTL2Q9UKU9 493 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 DUSP12Q9UNI6 340 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 MRPL11Q9Y3B7 192 aaKnown RBP2.68□□□□□ -1.98
XRN1-206ENST00000467077 POMT1Q9Y6A1 747 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 DMXL2Q8TDJ6 3036 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 TICRRQ7Z2Z1 1910 aa2.68□□□□□ -1.98
XRN1-206ENST00000467077 TDRD6O60522 2096 aaKnown RBP2.67□□□□□ -1.98
XRN1-206ENST00000467077 KIF26AQ9ULI4 1882 aaPredicted RBP2.67□□□□□ -1.98
XRN1-206ENST00000467077 CACNA1BQ00975 2339 aa2.67□□□□□ -1.98
XRN1-206ENST00000467077 A0A1W2PPW3 197 aa2.67□□□□□ -1.98
XRN1-206ENST00000467077 HTR3EA5X5Y0 456 aa2.67□□□□□ -1.98
XRN1-206ENST00000467077 RTCAO00442 366 aaKnown RBP2.67□□□□□ -1.98
XRN1-206ENST00000467077 TRAFD1O14545 582 aaPredicted RBP2.67□□□□□ -1.98
XRN1-206ENST00000467077 HMMRO75330 724 aa2.67□□□□□ -1.98
XRN1-206ENST00000467077 SAP30O75446 220 aa2.67□□□□□ -1.98
XRN1-206ENST00000467077 SIX3O95343 332 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms