RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CLK3P49761 638 aaKnown RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 NUP107P57740 925 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 PSPHP78330 225 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 MRPS22P82650 360 aaKnown RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 TLE4Q04727 773 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 LCP2Q13094 533 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 TRAF3Q13114 568 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 RCAN2Q14206 197 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 SLC29A2Q14542 456 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 HSPB2Q16082 182 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 NTRK2Q16620 822 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 HYAL4Q2M3T9 481 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 CCDC153Q494R4 210 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 SLC48A1Q6P1K1 146 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 SCIMPQ6UWF3 145 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 DGAT2L6Q6ZPD8 337 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 NCCRP1Q6ZVX7 275 aaPredicted RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 CHMP1BQ7LBR1 199 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 WDR53Q7Z5U6 358 aaPredicted RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 TMEM200AQ86VY9 491 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 C17orf47Q8NEP4 570 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 OR1J4Q8NGS1 313 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 LILRB4Q8NHJ6 448 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 HSPBAP1Q96EW2 488 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 LCORQ96JN0 433 aaPredicted RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 BBS4Q96RK4 519 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 PPCSQ9HAB8 311 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 ZBTB26Q9HCK0 441 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 MID1IP1Q9NPA3 183 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 TMEM216Q9P0N5 145 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 FETUBQ9UGM5 382 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 MRTO4Q9UKD2 239 aaKnown RBP8.16□□□□□ -1.1
LDB1-203ENST00000461873 GRID1Q9ULK0 1009 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 OR10H1Q9Y4A9 318 aa8.16□□□□□ -1.1
LDB1-203ENST00000461873 NOTCH2Q04721 2471 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 A0A0G2JMM0 328 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 A0A1B0GVC2 190 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 A0A1W2PPB8 328 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 A0A1W2PRS3 328 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 SMIM23A6NLE4 172 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 WASHC1A8K0Z3 465 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 KIR3DP1A8MWS1 328 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 AHRRA9YTQ3 701 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 MANBAO00462 879 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 COPEO14579 308 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 DVL2O14641 736 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 REM1O75628 298 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 LRATO95237 230 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ATP1B1P05026 303 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 NAGAP17050 411 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 DDX5P17844 614 aaKnown RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 ABCD3P28288 659 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 PRKAA2P54646 552 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 FBXW4P57775 412 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 FUT7Q11130 342 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 MAP4K2Q12851 820 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ZNHIT3Q15649 155 aaPredicted RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 NNATQ16517 81 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 SLC25A35Q3KQZ1 300 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 BEND6Q5SZJ8 279 aaPredicted RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 SLC30A6Q6NXT4 461 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 LETMD1Q6P1Q0 360 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ENPP6Q6UWR7 440 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 RPS27LQ71UM5 84 aaKnown RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 NUP54Q7Z3B4 507 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 CCDC71Q8IV32 467 aaPredicted RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 PRR22Q8IZ63 422 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 OR52R1Q8NGF1 315 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 OR14L1PQ8NHC6 308 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 NEIL3Q8TAT5 605 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 SPPL2AQ8TCT8 520 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 AENQ8WTP8 325 aaKnown RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 EXOSC8Q96B26 276 aaKnown RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 RILPQ96NA2 401 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ZNF382Q96SR6 550 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 HBEGFQ99075 208 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 TTYH2Q9BSA4 534 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 C1QTNF3Q9BXJ4 246 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ZNF717Q9BY31 904 aaPredicted RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 SHCBP1LQ9BZQ2 653 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 UCK2Q9BZX2 261 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ZNF703Q9H7S9 590 aaPredicted RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 ACKR4Q9NPB9 350 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 FARSBQ9NSD9 589 aaKnown RBP8.15□□□□□ -1.1
LDB1-203ENST00000461873 TAS2R9Q9NYW1 312 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 TNFRSF10DQ9UBN6 386 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 CAMK2AQ9UQM7 478 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 DLGAP4Q9Y2H0 992 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 PCDHGB3Q9Y5G1 929 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 ZNF407Q9C0G0 2248 aa8.15□□□□□ -1.1
LDB1-203ENST00000461873 NCOA6Q14686 2063 aaPredicted RBP8.15□□□□□ -1.11
LDB1-203ENST00000461873 PHF3Q92576 2039 aaKnown RBP8.15□□□□□ -1.11
LDB1-203ENST00000461873 CACNA1CQ13936 2221 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms