RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CXorf56Q9H5V9 222 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 PRM3Q9NNZ6 103 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 PRDM7Q9NQW5 492 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 KLHL28Q9NXS3 571 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 CTNNAL1Q9UBT7 734 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 H0Y3Z8 333 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 SIAH2O43255 324 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 F12P00748 615 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-202ENST00000461127 AHSGP02765 367 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 KRT15P19012 456 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 CPN2P22792 545 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 CRYGSP22914 178 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 TMED10P49755 219 aaKnown RBP15.68■□□□□ 0.1
TOP3A-202ENST00000461127 IGLV3-21P80748 117 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-202ENST00000461127 RASA2Q15283 850 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 PPP1R3AQ16821 1122 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 ENPP6Q6UWR7 440 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 GCNT2Q8N0V5 402 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 TMEM171Q8WVE6 324 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 WNT2BQ93097 391 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 PPWD1Q96BP3 646 aaKnown RBP15.68■□□□□ 0.1
TOP3A-202ENST00000461127 PDLIM5Q96HC4 596 aaKnown RBP15.68■□□□□ 0.1
TOP3A-202ENST00000461127 TUBA1CQ9BQE3 449 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 TBCDQ9BTW9 1192 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 LGALS13Q9UHV8 139 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 USF3Q68DE3 2245 aa15.68■□□□□ 0.1
TOP3A-202ENST00000461127 ROS1P08922 2347 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 MED12LQ86YW9 2145 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 OR6C76A6NM76 312 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 CDC7O00311 574 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 MSTNO14793 375 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 SNPHO15079 494 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 FGF17O60258 216 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 TBX6O95947 436 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 SNRPAP09012 282 aaKnown RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 NID1P14543 1247 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 CPN1P15169 458 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 GABRB3P28472 473 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 PCYT1AP49585 367 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 NAGLUP54802 743 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 HERVK_113P63132 956 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ERVK-8P63133 956 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 CDKL1Q00532 357 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 KRTAP1-1Q07627 177 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 BICRALQ6AI39 1079 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ZC3HC1Q86WB0 502 aaKnown RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 OR4N5Q8IXE1 308 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ACOT4Q8N9L9 421 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 MTBPQ96DY7 904 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 PGM2Q96G03 612 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 VPS39Q96JC1 886 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 FAM111AQ96PZ2 611 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 F2RL3Q96RI0 385 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 PELOQ9BRX2 385 aaKnown RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ERVK-6Q9BXR3 956 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ANGPTL4Q9BY76 406 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 TMBIM4Q9HC24 238 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 TEX10Q9NXF1 929 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 CORO1CQ9ULV4 474 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ERVK-19Q9WJR5 959 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 VWA7Q9Y334 891 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 ABCA1O95477 2261 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 MED12Q93074 2177 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 HEATR5AQ86XA9 2040 aa15.67■□□□□ 0.1
TOP3A-202ENST00000461127 TRIM49D1C9J1S8 452 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 HRKO00198 91 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 TMCC2O75069 709 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 PAX1P15863 534 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 ALOX15P16050 662 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-202ENST00000461127 CHMP24386 653 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 ATP5A1P25705 553 aaKnown RBP15.66■□□□□ 0.1
TOP3A-202ENST00000461127 SLC12A2P55011 1212 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 ATP5J2P56134 94 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FBXW4P57775 412 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FAM27E3Q08E93 113 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 TNK1Q13470 666 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 AP5B1Q2VPB7 878 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 MROH9Q5TGP6 573 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FNDC7Q5VTL7 733 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FRA10AC1Q70Z53 315 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 VN1R5Q7Z5H4 357 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 YRDCQ86U90 279 aaKnown RBP15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FAM83FQ8NEG4 500 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-202ENST00000461127 SPPL2AQ8TCT8 520 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 TMEM41AQ96HV5 264 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 UCN2Q96RP3 112 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 EHD1Q9H4M9 534 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 SNX15Q9NRS6 342 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 GPRC5BQ9NZH0 403 aa15.66■□□□□ 0.1
TOP3A-202ENST00000461127 MTO1Q9Y2Z2 717 aaKnown RBP15.66■□□□□ 0.1
TOP3A-202ENST00000461127 FAM95CA0A1B0GW59 222 aa15.65■□□□□ 0.1
TOP3A-202ENST00000461127 GNB5O14775 395 aa15.65■□□□□ 0.1
TOP3A-202ENST00000461127 CLGNO14967 610 aa15.65■□□□□ 0.1
TOP3A-202ENST00000461127 TLX2O43763 284 aaPredicted RBP15.65■□□□□ 0.1
TOP3A-202ENST00000461127 OR10H2O60403 315 aa15.65■□□□□ 0.1
TOP3A-202ENST00000461127 SMNDC1O75940 238 aaKnown RBP eCLIP15.65■□□□□ 0.19e-6■■■■□ 24.8
TOP3A-202ENST00000461127 TLX1P31314 330 aaPredicted RBP15.65■□□□□ 0.1
TOP3A-202ENST00000461127 SOX18P35713 384 aa15.65■□□□□ 0.1
TOP3A-202ENST00000461127 CD79BP40259 229 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms