RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 FAM109AQ8N4B1 249 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 ZNF808Q8N4W9 903 aaPredicted RBP21.17■□□□□ 0.98
PTPN4-208ENST00000460289 FAM57AQ8TBR7 257 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 EML4Q9HC35 981 aaKnown RBP21.17■□□□□ 0.98
PTPN4-208ENST00000460289 SLC35C2Q9NQQ7 365 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 TUBA8Q9NY65 449 aaPredicted RBP21.17■□□□□ 0.98
PTPN4-208ENST00000460289 SENP1Q9P0U3 644 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 SLC17A7Q9P2U7 560 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 RAB21Q9UL25 225 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 ANKRD33BA6NCL7 494 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 RGS14O43566 566 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 NPHS1O60500 1241 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 SEC22BO75396 215 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 DDCP20711 480 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 PRPH2P23942 346 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 SMSP52788 366 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 DCAF7P61962 342 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 RPP38P78345 283 aaKnown RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 DUSP2Q05923 314 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 EXOSC7Q15024 291 aaKnown RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 RPS6KA2Q15349 733 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 CEBPEQ15744 281 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 TRMT12Q53H54 448 aaKnown RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 HIST2H2BCQ6DN03 193 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 NOXRED1Q6NXP6 359 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 XKRXQ6PP77 449 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 RNF165Q6ZSG1 346 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 TMEM251Q8N6I4 163 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 OR5M3Q8NGP4 307 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 ZNF675Q8TD23 568 aa21.16■□□□□ 0.98
PTPN4-208ENST00000460289 ITLN2Q8WWU7 325 aaPredicted RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 SECISBP2Q96T21 854 aaKnown RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 BOKQ9UMX3 212 aaPredicted RBP21.16■□□□□ 0.98
PTPN4-208ENST00000460289 E9PLN8 166 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 NPIPB8E9PQR5 432 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 ZNHIT1O43257 154 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 CBX7O95931 251 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 TPOP07202 933 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 FGF4P08620 206 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 NAGAP17050 411 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 MAGEA5P43359 124 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 GTF3C1Q12789 2109 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 ART3Q13508 389 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 SLC10A1Q14973 349 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 LTB4RQ15722 352 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 ZNF628Q5EBL2 1059 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 PRAMEF20Q5VT98 475 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 TMEM64Q6YI46 380 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 OR52R1Q8NGF1 315 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 CDC26Q8NHZ8 85 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.15■□□□□ 0.98
PTPN4-208ENST00000460289 DIO2Q92813 273 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 HSPBAP1Q96EW2 488 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 LCORQ96JN0 433 aaPredicted RBP21.15■□□□□ 0.98
PTPN4-208ENST00000460289 BBS4Q96RK4 519 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 VKORC1Q9BQB6 163 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 ZFP64Q9NPA5 681 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 MYNNQ9NPC7 610 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 MIEF1Q9NQG6 463 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 TAS2R7Q9NYW3 318 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 CNOT11Q9UKZ1 510 aaKnown RBP21.15■□□□□ 0.98
PTPN4-208ENST00000460289 CCL27Q9Y4X3 112 aa21.15■□□□□ 0.98
PTPN4-208ENST00000460289 POLR3HQ9Y535 204 aaPredicted RBP21.15■□□□□ 0.98
PTPN4-208ENST00000460289 ACOX3O15254 700 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 IGHG3P01860 377 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 PCSK2P16519 638 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 AGAP20933 346 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 COL8A1P27658 744 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 SOX18P35713 384 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 SERPINB5P36952 375 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 FBXW4P57775 412 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 MRPS35P82673 323 aaKnown RBP21.14■□□□□ 0.97
PTPN4-208ENST00000460289 KRT71Q3SY84 523 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 FAM71E1Q6IPT2 247 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 IKBIPQ70UQ0 350 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 CLYBLQ8N0X4 340 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 PHF12Q96QT6 1004 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 DOHHQ9BU89 302 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 ITPAQ9BY32 194 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 NXF5Q9H1B4 397 aaKnown RBP21.14■□□□□ 0.97
PTPN4-208ENST00000460289 C1orf109Q9NX04 203 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 DTX4Q9Y2E6 619 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 FIS1Q9Y3D6 152 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 CROCCQ5TZA2 2017 aa21.14■□□□□ 0.97
PTPN4-208ENST00000460289 OR14I1A6ND48 311 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 RGS16O15492 202 aaPredicted RBP21.13■□□□□ 0.97
PTPN4-208ENST00000460289 SNX4O95219 450 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 NEFHP12036 1026 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 DRD5P21918 477 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 ABCD3P28288 659 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 PPICP45877 212 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 EMDP50402 254 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 DUSP8Q13202 625 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 KIAA0040Q15053 153 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 ARL13AQ5H913 290 aaPredicted RBP21.13■□□□□ 0.97
PTPN4-208ENST00000460289 KANK2Q63ZY3 851 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 TMEM198Q66K66 360 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 CD163Q86VB7 1156 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 TICAM1Q8IUC6 712 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 FAM9CQ8IZT9 166 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms