RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TMIGD2Q96BF3 282 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CMTM5Q96DZ9 223 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 MMABQ96EY8 250 aaPredicted RBP9.71□□□□□ -0.86
USP39-210ENST00000459775 CLPTM1LQ96KA5 538 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 OR52E6Q96RD3 313 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CDC6Q99741 560 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CRB3Q9BUF7 120 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 ANKHQ9HCJ1 492 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 MYNNQ9NPC7 610 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 SLAMF7Q9NQ25 335 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CUTCQ9NTM9 273 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 C15orf38-AP3S2A0A0A6YYH1 394 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 B4E171 279 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MRASO14807 208 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 TOX3O15405 576 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 CFLARO15519 480 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 PROM1O43490 865 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CHST10O43529 356 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 B3GALT2O43825 422 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 PFDN1O60925 122 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 NME6O75414 186 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 KCNH1O95259 989 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 M6PRP20645 277 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 TTKP33981 857 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MSX2P35548 267 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 SOX11P35716 441 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CASP9P55211 416 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ITGA1P56199 1179 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MXRA7P84157 204 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SOWAHCQ53LP3 525 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 CPTPQ5TA50 214 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 LCN10Q6JVE6 187 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 RBM44Q6ZP01 1051 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 KMT5CQ86Y97 462 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 PRSS58Q8IYP2 241 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 GPR135Q8IZ08 494 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ST13P4Q8IZP2 240 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 CA13Q8N1Q1 262 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 RNF148Q8N7C7 305 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 AURKBQ96GD4 344 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 PEX11GQ96HA9 241 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ZBTB18Q99592 522 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 NLNQ9BYT8 704 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 KLHL4Q9C0H6 718 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CHRNA10Q9GZZ6 450 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 REEP4Q9H6H4 257 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ANKRA2Q9H9E1 313 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SERTAD3Q9UJW9 196 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 KLK13Q9UKR3 277 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 DAPP1Q9UN19 280 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 NDUFAF1Q9Y375 327 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SLC22A7Q9Y694 548 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 A0A1W2PP18 115 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 FITM1A5D6W6 292 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ANGPT2O15123 496 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SCN2BO60939 215 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 LDB3O75112 727 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CSO75390 466 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 ERAL1O75616 437 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 GSTT2P0CG29 244 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 GSTT2BP0CG30 244 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CALB2P22676 271 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 S100A3P33764 101 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 FEN1P39748 380 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 POU3F4P49335 361 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MRPL19P49406 292 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 KCNJ2P63252 427 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 GRM7Q14831 915 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 HERC3Q15034 1050 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 C6orf10Q5SRN2 563 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 HES3Q5TGS1 186 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SHISA6Q6ZSJ9 500 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 DSELQ8IZU8 1212 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ZCCHC7Q8N3Z6 543 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 SRFBP1Q8NEF9 429 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 STARD8Q92502 1023 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 PPCDCQ96CD2 204 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 METTL2AQ96IZ6 378 aaKnown RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 DPYSL5Q9BPU6 564 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MESP1Q9BRJ9 268 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SLC25A23Q9BV35 468 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 YIPF3Q9GZM5 350 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 GORASP2Q9H8Y8 452 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 SERHLQ9NQF3 203 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MIEF1Q9NQG6 463 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 ADAM29Q9UKF5 820 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 MAPRE3Q9UPY8 281 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
USP39-210ENST00000459775 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
USP39-210ENST00000459775 KIF26BQ2KJY2 2108 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 ADAMTS20P59510 1910 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 PCNX2A6NKB5 2137 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 SH3D21A4FU49 640 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 URADA6NGE7 173 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 SNTNA6NMZ2 147 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 CYR61O00622 381 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 B4GALT2O60909 372 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 SCELO95171 688 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 CPSF4O95639 269 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms