RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 COMTD1Q86VU5 262 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 OR4E2Q8NGC2 313 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 OR8J1Q8NGP2 316 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 NT5CQ8TCD5 201 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 NR4A3Q92570 626 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 GAL3ST3Q96A11 431 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 PRRC1Q96M27 445 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 SYNPO2LQ9H987 977 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 LIPT1Q9Y234 373 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 NCKAP1Q9Y2A7 1128 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 IFT52Q9Y366 437 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 PCDHGA3Q9Y5H0 932 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 M0R3H8 397 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 SYT5O00445 386 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 BMP4P12644 408 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 RAB8AP61006 207 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 INAQ16352 499 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 PODNL1Q6PEZ8 512 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 CASP12Q6UXS9 341 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 BTLAQ7Z6A9 289 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 KBTBD8Q8NFY9 601 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 MCFD2Q8NI22 146 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 OR1E3Q8WZA6 343 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 ELP4Q96EB1 424 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 SIPA1Q96FS4 1042 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 MROQ9BYG7 248 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 ZBTB20Q9HC78 741 aaPredicted RBP14.19□□□□□ -0.14
LDLR-202ENST00000455727 ZNF780BQ9Y6R6 833 aa14.19□□□□□ -0.14
LDLR-202ENST00000455727 ENTPD6O75354 484 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NME6O75414 186 aaPredicted RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 KLF8O95600 359 aaPredicted RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 APBB3O95704 486 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 TP53P04637 393 aaPredicted RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 TGFBR1P36897 503 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 FEN1P39748 380 aaKnown RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 MAN2A2P49641 1150 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NCF4Q15080 339 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 OCLNQ16625 522 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 ZNF750Q32MQ0 723 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 ZNF404Q494X3 552 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 SLC25A30Q5SVS4 291 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 RNLSQ5VYX0 342 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 C1orf94Q6P1W5 598 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 ENPP7Q6UWV6 458 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 TMEM107Q6UX40 140 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NRROSQ86YC3 692 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 AMER2Q8N7J2 671 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 OR6T1Q8NGN1 323 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NXF2Q9GZY0 626 aaKnown RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 C11orf16Q9NQ32 467 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 MAN2C1Q9NTJ4 1040 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 CALML5Q9NZT1 146 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 ZNF624Q9P2J8 865 aaPredicted RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 METTL15A6NJ78 407 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 H3BN98 237 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 EML2O95834 649 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 CTHP32929 405 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 RHAGQ02094 409 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 RGS1Q08116 209 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 TIMM50Q3ZCQ8 353 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NIPAL1Q6NVV3 410 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 VN1R4Q7Z5H5 301 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 DNAJC5GQ8N7S2 189 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 MINDY2Q8NBR6 621 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 MORN4Q8NDC4 146 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NUP43Q8NFH3 380 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 KLHL6Q8WZ60 621 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 WDR92Q96MX6 357 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 TRNT1Q96Q11 434 aaKnown RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 OR7D2Q96RA2 312 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 IL4I1Q96RQ9 567 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 MGLLQ99685 303 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 RACGAP1Q9H0H5 632 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 DSN1Q9H410 356 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 NTMQ9P121 344 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 MSRAQ9UJ68 235 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 KLHL20Q9Y2M5 609 aa14.18□□□□□ -0.14
LDLR-202ENST00000455727 RPL36Q9Y3U8 105 aaKnown RBP14.18□□□□□ -0.14
LDLR-202ENST00000455727 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 RFXAPO00287 272 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 TNFRSF10CO14798 259 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 SCAMP1O15126 338 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 SOX14O95416 240 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 EGFP01133 1207 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 C8orf89P0DMQ9 161 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 GRK5P34947 590 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 CLDN2P57739 230 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 BTN3A2P78410 334 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 ADAM15Q13444 863 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 ATP1A4Q13733 1029 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 KIR2DS3Q14952 304 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 OXA1LQ15070 435 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 GPAT3Q53EU6 434 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 ENTPD8Q5MY95 495 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 ZER1Q7Z7L7 766 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 ASPGQ86U10 573 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 OR4K5Q8NGD3 323 aa14.17□□□□□ -0.14
LDLR-202ENST00000455727 TM4SF19Q96DZ7 209 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms