RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RIBC1Q8N443 379 aaPredicted RBP19.52■□□□□ 0.72
HMGB3-205ENST00000455596 ADCY4Q8NFM4 1077 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 C16orf78Q8WTQ4 265 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 DIO2Q92813 273 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 MARVELD3Q96A59 401 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 CTHRC1Q96CG8 243 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 C11orf24Q96F05 449 aaPredicted RBP19.52■□□□□ 0.72
HMGB3-205ENST00000455596 SMC6Q96SB8 1091 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 EBPLQ9BY08 206 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 LDAHQ9H6V9 325 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 PROK2Q9HC23 129 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 ZFP64Q9NPA5 681 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 SIRT5Q9NXA8 310 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 LIPGQ9Y5X9 500 aa19.52■□□□□ 0.72
HMGB3-205ENST00000455596 MAST4O15021 2626 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 A0A1B0GVC2 190 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 LRATO95237 230 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 NUDT17P0C025 328 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 FBXW4P57775 412 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 RPP38P78345 283 aaKnown RBP19.51■□□□□ 0.71
HMGB3-205ENST00000455596 TRILQ7L0X0 811 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 SAMD14Q8IZD0 417 aaPredicted RBP19.51■□□□□ 0.71
HMGB3-205ENST00000455596 OR2W6PQ8NHA6 318 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 SPPL2AQ8TCT8 520 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 JSRP1Q96MG2 331 aaPredicted RBP19.51■□□□□ 0.71
HMGB3-205ENST00000455596 DOHHQ9BU89 302 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 IQCGQ9H095 443 aaKnown RBP19.51■□□□□ 0.71
HMGB3-205ENST00000455596 ZNF703Q9H7S9 590 aaPredicted RBP19.51■□□□□ 0.71
HMGB3-205ENST00000455596 GIMAP4Q9NUV9 329 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 COQ3Q9NZJ6 369 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 DTX4Q9Y2E6 619 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 HRH3Q9Y5N1 445 aa19.51■□□□□ 0.71
HMGB3-205ENST00000455596 NBPF19A0A087WUL8 3843 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ANKRD33BA6NCL7 494 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 AQP7O14520 342 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 BCKDKO14874 412 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 SUSD5O60279 629 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 CELA3AP09093 270 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ANXA4P09525 319 aaPredicted RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 MAN2A2P49641 1150 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ZNF763Q0D2J5 394 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 LTB4RQ15722 352 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 GXYLT1Q4G148 440 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 TRMT12Q53H54 448 aaKnown RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 TMEM198Q66K66 360 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 CCDC116Q8IYX3 515 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 PRR22Q8IZ63 422 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 OR52R1Q8NGF1 315 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ZNF675Q8TD23 568 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 EXOSC8Q96B26 276 aaKnown RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ZNF597Q96LX8 424 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 SECISBP2Q96T21 854 aaKnown RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 ITPAQ9BY32 194 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 NXF5Q9H1B4 397 aaKnown RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 RUBCNLQ9H714 662 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 EXO5Q9H790 373 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 RRAGDQ9NQL2 400 aaPredicted RBP19.5■□□□□ 0.71
HMGB3-205ENST00000455596 MKS1Q9NXB0 559 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 B4GALT7Q9UBV7 327 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 PRODH2Q9UF12 536 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 PLLPQ9Y342 182 aa19.5■□□□□ 0.71
HMGB3-205ENST00000455596 TRGV5A0A0B4J1U4 118 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 LRRC3CA6NJW4 275 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 CBX7O95931 251 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 RFPL3SP0C7P2 107 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 UROSP10746 265 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 ABCD3P28288 659 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 SOX18P35713 384 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 DCAF7P61962 342 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 IFFO1Q0D2I5 559 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 DUSP8Q13202 625 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 PCLAFQ15004 111 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 CDSNQ15517 529 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 NNATQ16517 81 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 EMC4Q5J8M3 183 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 TRIM46Q7Z4K8 759 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 C10orf107Q8IVU9 208 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 SDCCAG3Q96C92 435 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 HSPBAP1Q96EW2 488 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 APOPT1Q96IL0 206 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 LCORQ96JN0 433 aaPredicted RBP19.49■□□□□ 0.71
HMGB3-205ENST00000455596 SHCBP1LQ9BZQ2 653 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 PNPLA3Q9NST1 481 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 QPCTLQ9NXS2 382 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 EHD3Q9NZN3 535 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 HCFC1P51610 2035 aa19.49■□□□□ 0.71
HMGB3-205ENST00000455596 HCN1O60741 890 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 BCAS2O75934 225 aaPredicted RBP19.48■□□□□ 0.71
HMGB3-205ENST00000455596 RSL1D1O76021 490 aaKnown RBP19.48■□□□□ 0.71
HMGB3-205ENST00000455596 PCSK2P16519 638 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 NAGAP17050 411 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 MRPS35P82673 323 aaKnown RBP19.48■□□□□ 0.71
HMGB3-205ENST00000455596 C2orf80Q0P641 193 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 ZNF628Q5EBL2 1059 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 TRABD2AQ86V40 505 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 MARVELD2Q8N4S9 558 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 SIMC1Q8NDZ2 872 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 CDC26Q8NHZ8 85 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 CA5BP1Q8WTZ4 195 aa19.48■□□□□ 0.71
HMGB3-205ENST00000455596 SARAFQ96BY9 339 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms