RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RAET1E	Q8TD07	263 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	POF1B	Q8WVV4	589 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	GEMIN6	Q8WXD5	167 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	KLHL6	Q8WZ60	621 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FOPNL	Q96NB1	174 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SIGLEC11	Q96RL6	698 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	GABARAPL3	Q9BY60	117 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	MED20	Q9H944	212 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	RDH14	Q9HBH5	336 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	KLHL1	Q9NR64	748 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TXNL4B	Q9NX01	149 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	DPP7	Q9UHL4	492 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	KLF15	Q9UIH9	416 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	ENPP4	Q9Y6X5	453 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	HSPE1-MOB4	S4R3N1	261 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	PIPSL	A2A3N6	862 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	HEPACAM2	A8MVW5	462 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	TOR1A	O14656	332 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	ELFN1	P0C7U0	828 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	HOXB3	P14651	431 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	LASP1	Q14847	261 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	LARS2	Q15031	903 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	QPRT	Q15274	297 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	FAM46D	Q8NEK8	389 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	C1GALT1	Q9NS00	363 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	MCUB	Q9NWR8	336 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	MKLN1	Q9UL63	735 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312		V9GYH0	126 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	TRPM7	Q96QT4	1865 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	DOCK9	Q9BZ29	2069 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	OR5K4	A6NMS3	321 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	MMP20	O60882	483 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	GABRB1	P18505	474 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	GRM7	Q14831	915 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	HEPACAM	Q14CZ8	416 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	TATDN3	Q17R31	274 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	GPAT3	Q53EU6	434 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	GDPD4	Q6W3E5	623 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	OR4C15	Q8NGM1	316 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	CD99L2	Q8TCZ2	262 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	UBTD2	Q8WUN7	234 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	TM9SF4	Q92544	642 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	RIT1	Q92963	219 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	MIXL1	Q9H2W2	232 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	GHITM	Q9H3K2	345 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	TEX10	Q9NXF1	929 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	ERVW-1	Q9UQF0	538 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	ANGPT4	Q9Y264	503 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	CSNK1G3	Q9Y6M4	447 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	LAMA1	P25391	3075 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	SEC16A	O15027	2179 aa		11.87	□□□□□ -0.51
DDR1-238	ENST00000446312	LALBA	P00709	142 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	MRPL3	P09001	348 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	ZNF250	P15622	560 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SELP	P16109	830 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	CD72	P21854	359 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SSTR2	P30874	369 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	CRYBB2	P43320	205 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	GPR4	P46093	362 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SCN1B	Q07699	218 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SCRN3	Q0VDG4	424 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	CAMK1	Q14012	370 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	VEZF1	Q14119	521 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	GALE	Q14376	348 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	LY6G5C	Q5SRR4	150 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	ANXA8L1	Q5VT79	327 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	TCTN3	Q6NUS6	607 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	PODNL1	Q6PEZ8	512 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	CNIH2	Q6PI25	160 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	CFAP77	Q6ZQR2	320 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	BBS1	Q8NFJ9	593 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	HMGB4	Q8WW32	186 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	DNAJA3	Q96EY1	480 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	TMEM80	Q96HE8	168 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	TAAR2	Q9P1P5	351 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	NOSIP	Q9Y314	301 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	INSL5	Q9Y5Q6	135 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	TRAV20	A0A0B4J274	112 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	LRRC72	A6NJI9	287 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	LEFTY2	O00292	366 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	PROS1	P07225	676 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SLC2A2	P11168	524 aa	Predicted RBP	11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	NPPB	P16860	134 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	TIE1	P35590	1138 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	UGT2B10	P36537	528 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	XCR1	P46094	333 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SOX9	P48436	509 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SRP9	P49458	86 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	GPR50	Q13585	617 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	IDNK	Q5T6J7	187 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	ZNF367	Q7RTV3	350 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	MARCH9	Q86YJ5	346 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	SHISA5	Q8N114	240 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312		Q8N402	240 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	ZBTB44	Q8NCP5	570 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	DEDD2	Q8WXF8	326 aa		11.86	□□□□□ -0.51
DDR1-238	ENST00000446312	C16orf58	Q96GQ5	468 aa		11.86	□□□□□ -0.51

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