RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SLC6A20Q9NP91 592 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC177Q9NQR7 707 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 FARSBQ9NSD9 589 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GPRC5BQ9NZH0 403 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CPNE7Q9UBL6 633 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TAC3Q9UHF0 121 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TRPS1Q9UHF7 1281 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 POLG2Q9UHN1 485 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TMEFF2Q9UIK5 374 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF490Q9ULM2 529 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 COA3Q9Y2R0 106 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MEMO1Q9Y316 297 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ANGPTL3Q9Y5C1 460 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CSAG2Q9Y5P2 127 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 HEBP2Q9Y5Z4 205 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 COLEC10Q9Y6Z7 277 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ATP6AP2A0A1C7CYW4 349 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 OR6C74A6NCV1 312 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PABPN1LA6NDY0 278 aaKnown RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 C9J4A7 227 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SLCO1B7G3V0H7 640 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 H7BY64 318 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 MANBAO00462 879 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 HAT1O14929 419 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SPRY1O43609 319 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CTAG2O75638 210 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ATP6AP2O75787 350 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 UBXN7O94888 489 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SNUPNO95149 360 aaKnown RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CLDN9O95484 217 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ETHE1O95571 254 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TBX6O95947 436 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PDYNP01213 254 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 RAF1P04049 648 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ENO1P06733 434 aaKnown RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CD63P08962 238 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 HOXD4P09016 255 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 LINC00032P0C843 101 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PRR35P0CG20 571 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 C1GALT1C1LP0DN25 315 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TROVE2P10155 538 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 UROSP10746 265 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 UGT2B7P16662 529 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TYRP1P17643 537 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 AMD1P17707 334 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 POLR2CP19387 275 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CCND1P24385 295 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 EPHA3P29320 983 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SHMT2P34897 504 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 THBS2P35442 1172 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 HSD17B2P37059 387 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 BCL6P41182 706 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 NEK2P51955 445 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 REEP5Q00765 189 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 HMGCS1Q01581 520 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 IRF8Q02556 426 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 KRT33BQ14525 404 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ABRAXAS2Q15018 415 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 NCF4Q15080 339 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TBCCQ15814 346 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ZIC1Q15915 447 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 C3AR1Q16581 482 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 LSM12Q3MHD2 195 aaKnown RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 XKR6Q5GH73 641 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 GKAP1Q5VSY0 366 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 LIPJQ5W064 366 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ICE2Q659A1 982 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF425Q6IV72 752 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 RNF165Q6ZSG1 346 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 Q6ZSR9 355 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 LARP4Q71RC2 724 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PAQR7Q86WK9 346 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 KMT5CQ86Y97 462 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PLD3Q8IV08 490 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TRIM48Q8IWZ4 208 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC197Q8NCU1 140 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ABHD11Q8NFV4 315 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 OR2L3Q8NG85 312 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 OR4K1Q8NGD4 311 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 OR1N1Q8NGS0 311 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 WDR20Q8TBZ3 569 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 METTL6Q8TCB7 284 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ZFPM2Q8WW38 1151 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 LCN9Q8WX39 176 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 STON2Q8WXE9 905 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 RSC1A1Q92681 617 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ATP6V1E2Q96A05 226 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SDCCAG3Q96C92 435 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PTCD3Q96EY7 689 aaKnown RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 MARK4Q96L34 752 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PRAP1Q96NZ9 151 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 HAUS8Q9BT25 410 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 NDC1Q9BTX1 674 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 RAB11FIP5Q9BXF6 653 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ACPTQ9BZG2 426 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 NMUR2Q9GZQ4 415 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms