RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ST14Q9Y5Y6 855 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 A0A0D9SEW6 157 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 LSM1O15116 133 aaKnown RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 CDK2P24941 298 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 CD83Q01151 205 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 GALNT2Q10471 571 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 GINS1Q14691 196 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 NNATQ16517 81 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 GPR157Q5UAW9 335 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 KIAA0907Q7Z7F0 614 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 C14orf80Q86SX3 495 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 PDSS2Q86YH6 399 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 ZC3H3Q8IXZ2 948 aaKnown RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 DDX1Q92499 740 aaKnown RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 HDAC2Q92769 488 aaKnown RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 SFXN2Q96NB2 322 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 PEBP4Q96S96 227 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 TUBA1CQ9BQE3 449 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 SYT3Q9BQG1 590 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 HDHD5Q9BXW7 423 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 SRA1Q9HD15 236 aaKnown RBP8.54□□□□□ -1.04
CTNND1-208ENST00000428599 CD207Q9UJ71 328 aa8.54□□□□□ -1.04
CTNND1-208ENST00000428599 A6NL46 340 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 MEIS3P2A8K0S8 358 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 FAM155AB1AL88 458 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SOCS2O14508 198 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 THEGLP0DJG4 465 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 DRD2P14416 443 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ABOP16442 354 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 LMAN2Q12907 356 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 TGFBIQ15582 683 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CST6Q15828 149 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SLC27A4Q6P1M0 643 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 LARP4Q71RC2 724 aaKnown RBP eCLIP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 LILRB2Q8N423 598 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 OR52P1PQ8NH57 321 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 TPSD1Q9BZJ3 242 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RGCCQ9H4X1 137 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 PLSCR5A0PG75 271 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RAB4BP61018 213 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 LPAL2Q16609 132 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 TMEM107Q6UX40 140 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 FITM2Q8N6M3 262 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 OR8K5Q8NH50 307 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 C10orf82Q8WW14 230 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 POTEKPQ9BYX7 375 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RLIMQ9NVW2 624 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SARDHQ9UL12 918 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ITGB4P16144 1822 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 IGLON5A6NGN9 336 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CLCA1A8K7I4 914 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 AXIN1O15169 862 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CD79AP11912 226 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 BMPR1AP36894 532 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 NAA10P41227 235 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CRYZQ08257 329 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 MFSD13AQ14CX5 517 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 PIGGQ5H8A4 983 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SPANXN4Q5MJ08 99 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 MRPL21Q7Z2W9 205 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 BORCS6Q96GS4 357 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 C1orf74Q96LT6 269 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CNN2Q99439 309 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 DPH7Q9BTV6 452 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CPEB1Q9BZB8 566 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 PTTG2Q9NZH5 202 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ATXN7L1Q9ULK2 861 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 TP53TG5Q9Y2B4 290 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 A0A1W2PP18 115 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 GXYLT2A0PJZ3 443 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ANKRD30BLA7E2S9 258 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RFPL2O75678 378 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 F7P08709 466 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ACRV1P26436 265 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 GSK3BP49841 420 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CAMK2DQ13557 499 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 STK11Q15831 433 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 UGT3A2Q3SY77 523 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 OR4C11Q6IEV9 310 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 GPRIN1Q7Z2K8 1008 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RELL1Q8IUW5 271 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 PAPD5Q8NDF8 572 aaKnown RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 AURKBQ96GD4 344 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 CDCA3Q99618 268 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SLC30A2Q9BRI3 323 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 NANSQ9NR45 359 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 HIF1ANQ9NWT6 349 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 RNF6Q9Y252 685 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 C2orf78A6NCI8 922 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ARGFXA6NJG6 315 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 MEN1O00255 615 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 LILRB5O75023 590 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 SDC3O75056 442 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 IGHEP01854 428 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 AOC1P19801 751 aa8.53□□□□□ -1.04
CTNND1-208ENST00000428599 ADH6P28332 368 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms