RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MAGEA4P43358 317 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 PIK3CGP48736 1102 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 XKP51811 444 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 DGKQP52824 942 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 ACAP2Q15057 778 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 PRICKLE4Q2TBC4 344 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 OR52E8Q6IFG1 317 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CYP20A1Q6UW02 462 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 NUDT13Q86X67 352 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 GALNT12Q8IXK2 581 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 PRR22Q8IZ63 422 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 FAM83FQ8NEG4 500 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-209ENST00000425239 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 OR52B6Q8NGF0 335 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CTHRC1Q96CG8 243 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 HSPBAP1Q96EW2 488 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CDK15Q96Q40 435 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 TRIB1Q96RU8 372 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 NODALQ96S42 347 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 ZBTB26Q9HCK0 441 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CAMK2AQ9UQM7 478 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 SYCE1LA8MT33 242 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 B4DXG7 233 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 GNB5O14775 395 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 ICOSLGO75144 302 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 PPM1BO75688 479 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 SEMA3DO95025 777 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 CPMP14384 443 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 CD53P19397 219 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 OPRM1P35372 400 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 PAFAH1B1P43034 410 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 DUSP2Q05923 314 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 MAP4K2Q12851 820 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 CALCOCO2Q13137 446 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.236e-9■■■□□ 18.7
ATG4B-209ENST00000425239 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
ATG4B-209ENST00000425239 FAM111BQ6SJ93 734 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 YRDCQ86U90 279 aaKnown RBP13.64□□□□□ -0.23
ATG4B-209ENST00000425239 KIF18BQ86Y91 864 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 MYLK4Q86YV6 388 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-209ENST00000425239 PLD6Q8N2A8 252 aaKnown RBP13.64□□□□□ -0.23
ATG4B-209ENST00000425239 OR7G1Q8NGA0 311 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 OR4K14Q8NGD5 310 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 FBXO25Q8TCJ0 367 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 REPS1Q96D71 796 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 LRRC46Q96FV0 321 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 NTMT1Q9BV86 223 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 EDARQ9UNE0 448 aa13.64□□□□□ -0.23
ATG4B-209ENST00000425239 FN1P02751 2386 aaKnown RBP13.64□□□□□ -0.23
ATG4B-209ENST00000425239 A0A087X1B8 175 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 CLCA1A8K7I4 914 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 KLHL2O95198 593 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 RCBTB2O95199 551 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 GOSR1O95249 250 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 CLDN9O95484 217 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 ACTL6AO96019 429 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
ATG4B-209ENST00000425239 KLK1P06870 262 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 PORP16435 677 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-209ENST00000425239 PIK3R1P27986 724 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 PLTPP55058 493 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 GFRA1P56159 465 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 FAM83EQ2M2I3 478 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 MROH9Q5TGP6 573 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 NUP54Q7Z3B4 507 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 CCDC91Q7Z6B0 441 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 CXorf67Q86X51 503 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-209ENST00000425239 TRPC4APQ8TEL6 797 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 SERPINI1Q99574 410 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
ATG4B-209ENST00000425239 WDR41Q9HAD4 459 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 GALNT9Q9HCQ5 603 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 MAT2BQ9NZL9 334 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 ADAM29Q9UKF5 820 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 EXO1Q9UQ84 846 aaKnown RBP13.63□□□□□ -0.23
ATG4B-209ENST00000425239 ANGPTL3Q9Y5C1 460 aa13.63□□□□□ -0.23
ATG4B-209ENST00000425239 SNPHO15079 494 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 UGT2B11O75310 529 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 CBX7O95931 251 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 ATP1B1P05026 303 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 GFAPP14136 432 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
ATG4B-209ENST00000425239 NRG3P56975 720 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 LTBQ06643 244 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 GALNT1Q10472 559 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-209ENST00000425239 TRAF3Q13114 568 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 SNTA1Q13424 505 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 NAB1Q13506 487 aa13.62□□□□□ -0.23
ATG4B-209ENST00000425239 UBAP2Q5T6F2 1119 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms