RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 A0A1B0GVL5 298 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 FAM231BA6NCW3 169 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 TRIM64CA6NLI5 447 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 TRIM49D1C9J1S8 452 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 GOLGA6L19H0YKK7 550 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 EIF3HO15372 352 aaKnown RBP eCLIP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 ZSCAN12O43309 604 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 VIMP08670 466 aaKnown RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC166P0CW27 439 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC192P0DO97 292 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 ALDH3A1P30838 453 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 GNB2P62879 340 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 NUCB1Q02818 461 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 XRCC4Q13426 336 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CASP8Q14790 479 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 RCN1Q15293 331 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 BCL2A1Q16548 175 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 SHROOM1Q2M3G4 852 aaPredicted RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 PARP10Q53GL7 1025 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 LRRC73Q5JTD7 316 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 OTPQ5XKR4 325 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 NANOGNBQ7Z5D8 188 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 LUZP1Q86V48 1076 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 HOOK3Q86VS8 718 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 ERICH1Q86X53 443 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 PEX5LQ8IYB4 626 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 H1FOOQ8IZA3 346 aaPredicted RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF491Q8N8L2 437 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 MAIP1Q8WWC4 291 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 LZICQ8WZA0 190 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 PPP1R14BQ96C90 147 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 STARD4Q96DR4 205 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 DHTKD1Q96HY7 919 aaPredicted RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 VSIG2Q96IQ7 327 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 TSSK2Q96PF2 358 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 RUFY1Q96T51 708 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 SLC39A3Q9BRY0 314 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 VIPAS39Q9H9C1 493 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 ANO10Q9NW15 660 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 AATFQ9NY61 560 aaKnown RBP eCLIP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 KLHL21Q9UJP4 597 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 L3MBTL1Q9Y468 752 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CEP152O94986 1710 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 SUPT6HQ7KZ85 1726 aaKnown RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 IQGAP2Q13576 1575 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 MYH11P35749 1972 aa2.78□□□□□ -1.97
LINC01040-201ENST00000425048 UGGT2Q9NYU1 1516 aa2.78□□□□□ -1.97
LINC01040-201ENST00000425048 MYH6P13533 1939 aa2.78□□□□□ -1.97
LINC01040-201ENST00000425048 MYOM2P54296 1465 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 SNAPC4Q5SXM2 1469 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 BCL9O00512 1426 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PREX1Q8TCU6 1659 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 C2orf92A0A1B0GVN3 265 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 LRRIQ3A6PVS8 624 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 TMEM110-MUSTN1A8MSY1 372 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 LSM1O15116 133 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 HMMRO75330 724 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ATP6V1G2O95670 118 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 MOCS2O96007 188 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CCDC159P0C7I6 412 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 EIF2S2P20042 333 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ID1P41134 155 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CAPZA2P47755 286 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PSMD7P51665 324 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CCNG1P51959 295 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 LRRC63Q05C16 580 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PPIDQ08752 370 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 IFFO1Q0D2I5 559 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PSG7Q13046 419 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 RIPK1Q13546 671 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 WHAMMP3Q1A5X7 153 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 USH1GQ495M9 461 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CMPK2Q5EBM0 449 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 THOC7Q6I9Y2 204 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 TMEM53Q6P2H8 277 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 BTNL8Q6UX41 500 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 NLRP14Q86W24 1093 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 C14orf178Q8N769 122 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CTNNBL1Q8WYA6 563 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ST6GALNAC6Q969X2 333 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 OPTNQ96CV9 577 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 BPIFA2Q96DR5 249 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 JAKMIP1Q96N16 626 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 OR5M11Q96RB7 305 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 SH3GL1Q99961 368 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 BPIFA3Q9BQP9 254 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 OSBPL10Q9BXB5 764 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CAPS2Q9BXY5 557 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 RPAP3Q9H6T3 665 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ELL3Q9HB65 397 aaPredicted RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 MED17Q9NVC6 651 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 IMPAD1Q9NX62 359 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 SPG21Q9NZD8 308 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ZMAT5Q9UDW3 170 aaKnown RBP2.77□□□□□ -1.97
LINC01040-201ENST00000425048 CIDEBQ9UHD4 219 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 ATP6V0A2Q9Y487 856 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 PCDHGA1Q9Y5H4 931 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 SMARCA4P51532 1647 aa2.77□□□□□ -1.97
LINC01040-201ENST00000425048 RNF17Q9BXT8 1623 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms