RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 EEF1DP29692 281 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 HNRNPH1P31943 449 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 GGT5P36269 586 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 SLC26A3P40879 764 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 XCR1P46094 333 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 PLA2G16P53816 162 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 IRF8Q02556 426 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 OCA2Q04671 838 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 RGS1Q08116 209 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 GTF2H2Q13888 395 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 NDUFA9Q16795 377 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 GTF2H2CQ6P1K8 395 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 PRMT9Q6P2P2 845 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 KLHL17Q6TDP4 642 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 TMIGD1Q6UXZ0 262 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 LANCL3Q6ZV70 420 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 LRRC70Q7Z2Q7 622 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 GOLGA7Q7Z5G4 137 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 KCTD20Q7Z5Y7 419 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 KLHDC8AQ8IYD2 350 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 C4orf33Q8N1A6 199 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ZNF843Q8N446 348 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 TBC1D19Q8N5T2 526 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 FDCSPQ8NFU4 85 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 OR52B6Q8NGF0 335 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 OR51Q1Q8NH59 317 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 C9orf43Q8TAL5 461 aaPredicted RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 UTP15Q8TED0 518 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 CREB3L4Q8TEY5 395 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 AENQ8WTP8 325 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 UBTD2Q8WUN7 234 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 APOBEC4Q8WW27 367 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 TSLPQ969D9 159 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 FKBP10Q96AY3 582 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 DACT3Q96B18 629 aaPredicted RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 CATSPER2Q96P56 530 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 C17orf62Q9BQA9 187 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 SLC25A23Q9BV35 468 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 NUDT9Q9BW91 350 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 TRIM4Q9C037 500 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ING2Q9H160 280 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 WDR54Q9H977 334 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 CNOT10Q9H9A5 744 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 ZNF160Q9HCG1 818 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 SEMA4BQ9NPR2 832 aaPredicted RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 P4HTMQ9NXG6 502 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 TMEM216Q9P0N5 145 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ZNF282Q9UDV7 671 aaPredicted RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 C3orf18Q9UK00 162 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 FBXL4Q9UKA2 621 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ZNF490Q9ULM2 529 aaPredicted RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 CDC14AQ9UNH5 594 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 RNF11Q9Y3C5 154 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 HS3ST3B1Q9Y662 390 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ZNF462Q96JM2 2506 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 ARHGAP10A1A4S6 786 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 ANKDD1BA6NHY2 528 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 SYCE1LA8MT33 242 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 A8MT66 165 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 A8MUA0 341 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 IDSB3KWA1 339 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 H0YIG0 161 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 MKRN2OSH3BPM6 223 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 AGPSO00116 658 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 E2F3O00716 465 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 PPP6CO00743 305 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 OR7A17O14581 309 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 PRPF4O43172 522 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS41-205ENST00000414632 ERI3O43414 337 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 CHST10O43529 356 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 RRP9O43818 475 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 KLK8O60259 260 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 CDC14BO60729 498 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 GALR3O60755 368 aaPredicted RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 B4GALT2O60909 372 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 ACTL6BO94805 426 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 BMP10O95393 424 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 NSA2O95478 260 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 TBX6O95947 436 aaPredicted RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 ONECUT2O95948 504 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 F10P00742 488 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 RBP1P09455 135 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 MMP11P24347 488 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 CXCR2P25025 360 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 ITGA3P26006 1051 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 CERS1P27544 350 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 AHRP35869 848 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 CCNG1P51959 295 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 HNRNPFP52597 415 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 CHN2P52757 468 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 EMP2P54851 167 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 ALDH18A1P54886 795 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 CDH13P55290 713 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 RPS13P62277 151 aaKnown RBP4.57□□□□□ -1.68
VPS41-205ENST00000414632 BTN3A2P78410 334 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 BTG2P78543 158 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 RELAQ04206 551 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 Q0VFX4 171 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 FAM53BQ14153 422 aa4.57□□□□□ -1.68
VPS41-205ENST00000414632 HIST2H2ACQ16777 129 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms