RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 FAM171BQ6P995 826 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 GFRALQ6UXV0 394 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 DPY19L2P2Q6ZN68 376 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ASB18Q6ZVZ8 466 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 DPY19L4Q7Z388 723 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SFR1Q86XK3 245 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 TMEM219Q86XT9 240 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 KMT5CQ86Y97 462 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 DCP1BQ8IZD4 617 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SPERTQ8NA61 448 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 OR52N5Q8NH56 324 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 FAM81AQ8TBF8 368 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 GPR148Q8TDV2 347 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 MCUR1Q96AQ8 359 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ISG20Q96AZ6 181 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SLC25A36Q96CQ1 311 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 LRRC39Q96DD0 335 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 RTP4Q96DX8 246 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ABHD8Q96I13 439 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 AKR1E2Q96JD6 320 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ACCSQ96QU6 501 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 CCM2Q9BSQ5 444 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ERVK-6Q9BXR3 956 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 GAREM1Q9H706 876 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 VIPAS39Q9H9C1 493 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 LPAR2Q9HBW0 351 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 GDF3Q9NR23 364 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 C1orf123Q9NWV4 160 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SLC7A7Q9UM01 511 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 PIGLQ9Y2B2 252 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ATP10DQ9P241 1426 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 UMODL1Q5DID0 1318 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 FGD5Q6ZNL6 1462 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 PPIAL4CA0A0B4J2A2 164 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 TRBV5-5A0A0J9YX44 114 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SERINC4A6NH21 518 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 A8MVM7 634 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SUPT3HB4E1H0 165 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF587BE7ETH6 402 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 H0YL77 283 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 H3BTX0 84 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 FPGTO14772 594 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 NVLO15381 856 aaKnown RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 KCNAB3O43448 404 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 MTRF1O75570 445 aaKnown RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 STK17BO94768 372 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 ALPLP05186 524 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PPIAL4GP0DN37 164 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 TROVE2P10155 538 aaKnown RBP eCLIP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 UQCRBP14927 111 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 ITGA2P17301 1181 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 EPHA2P29317 976 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 MAGEA8P43361 318 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 CDKN1BP46527 198 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 HTR5AP47898 357 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SRYQ05066 204 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 MEF2DQ14814 521 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 MAPK6Q16659 721 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 TMEM44Q2T9K0 475 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 DCAF10Q5QP82 559 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 KIAA1161Q6NSJ0 714 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 RFPL4BQ6ZWI9 263 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 P4HA3Q7Z4N8 544 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SATL1Q86VE3 508 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PARGQ86W56 976 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PAQR7Q86WK9 346 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 WDR49Q8IV35 697 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 KATNAL2Q8IYT4 538 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 GPR137CQ8N3F9 429 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 DNAJC22Q8N4W6 341 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 COMMD1Q8N668 190 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 MAPKAPK5-AS1Q8N8E1 139 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SYT14Q8NB59 555 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 OR7A2PQ8NGA2 310 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 KCNG3Q8TAE7 436 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 CD99L2Q8TCZ2 262 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SMPDL3AQ92484 453 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 HSD17B8Q92506 261 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SH3YL1Q96HL8 342 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 RPRD1AQ96P16 312 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 NEDD4LQ96PU5 975 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 OR2B2Q9GZK3 357 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 LAT2Q9GZY6 243 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 RHOJQ9H4E5 214 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SDR39U1Q9NRG7 319 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 FGF21Q9NSA1 209 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SLC2A8Q9NY64 477 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 FLRT3Q9NZU0 649 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PIPOXQ9P0Z9 390 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PISDQ9UG56 409 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PILRBQ9UKJ0 227 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 EMCNQ9ULC0 261 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 PACSIN2Q9UNF0 486 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-204ENST00000412061 WDR45Q9Y484 360 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 RIPK3Q9Y572 518 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 N6AMT1Q9Y5N5 214 aa4.01□□□□□ -1.77
BRCA1-204ENST00000412061 SPATA31D1Q6ZQQ2 1576 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms