RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HERVK_113P63132 956 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ERVK-8P63133 956 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 IL24Q13007 206 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 TMED1Q13445 227 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 TRIP10Q15642 601 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 HAGHQ16775 308 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 HKDC1Q2TB90 917 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 POM121L1PQ3SYA9 428 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 RABL6Q3YEC7 729 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF311Q5JNZ3 666 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 CFAP157Q5JU67 520 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 RHBDD2Q6NTF9 364 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 NEPROQ6NW34 567 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 STEAP1BQ6NZ63 245 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF730Q6ZMV8 503 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC26A9Q7LBE3 791 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 FAM131BQ86XD5 332 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 CATSPERDQ86XM0 798 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 LINC00518Q8N0U6 118 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 RELL2Q8NC24 303 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 RPLP0P6Q8NHW5 317 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLCO2A1Q92959 643 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF486Q96H40 463 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 KRT12Q99456 494 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 OVOL2Q9BRP0 275 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ERVK-6Q9BXR3 956 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 MTHFD2LQ9H903 347 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 UBE2TQ9NPD8 197 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 TUBGCP4Q9UGJ1 667 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ATP6V1HQ9UI12 483 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 FANCIQ9NVI1 1328 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 LOC390937A0A1W2PQ73 354 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 BLOC1S5-TXNDC5H3BN57 136 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 TNFSF12O43508 249 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 PCDH7O60245 1069 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 RPLP0P05388 317 aaKnown RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 PRSS1P07477 247 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 MBL2P11226 248 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 GZMAP12544 262 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 PBLDP30039 288 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 COX10Q12887 443 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 MTF1Q14872 753 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 PDK4Q16654 411 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 CDKN3Q16667 212 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 PARP6Q2NL67 630 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 CCDC152Q4G0S7 254 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 LRRC23Q53EV4 343 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 RANBP3LQ86VV4 465 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 GPBP1Q86WP2 473 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 HOGA1Q86XE5 327 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZCCHC7Q8N3Z6 543 aaKnown RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 CHDHQ8NE62 594 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR9Q2Q8NGE9 314 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR6F1Q8NGZ6 308 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR6S1Q8NH40 331 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 C17orf50Q8WW18 174 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 TMEM190Q8WZ59 177 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 OSTF1Q92882 214 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 VSTM2LQ96N03 204 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 TTC25Q96NG3 672 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 GSDMAQ96QA5 445 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 VPS35Q96QK1 796 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF696Q9H7X3 374 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 RDH8Q9NYR8 311 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 COX16Q9P0S2 106 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 KLK11Q9UBX7 282 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 MRPS18CQ9Y3D5 142 aaKnown RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 ASB3Q9Y575 518 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 ANGPTL3Q9Y5C1 460 aa4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 KLF2Q9Y5W3 355 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P13-201ENST00000406019 DCAF1Q9Y4B6 1507 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 BRD4O60885 1362 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 PIK3R4Q99570 1358 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZSCAN5CA6NGD5 496 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 PMS2P5A8MQ11 134 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 H3BTX0 84 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 SDC3O75056 442 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 TOXO94900 526 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 MBD3O95983 291 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 SELEP16581 610 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 CA8P35219 290 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 PGFP49763 221 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 CNTN2Q02246 1040 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 RIPK1Q13546 671 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 EXOSC2Q13868 293 aaKnown RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 HNRNPDQ14103 355 aaKnown RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC17A1Q14916 467 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 LINC01620Q4KN68 170 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 OTUD3Q5T2D3 398 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 DDI2Q5TDH0 399 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 CCDC36Q8IYA8 594 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 CNBD1Q8NA66 436 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 DDHD1Q8NEL9 900 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 ATP8B4Q8TF62 1192 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF75CPQ92670 426 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF300Q96RE9 604 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 DCTPP1Q9H773 170 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 KAT8Q9H7Z6 458 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms