RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CCM2LQ9NUG4 571 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CMTM6Q9NX76 183 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 KCND3Q9UK17 655 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TMPRSS11EQ9UL52 423 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZFAND5O76080 213 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 P04436 131 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 RETP07949 1114 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TTKP33981 857 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 HBA1P69905 142 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 COLEC12Q5KU26 742 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 RAB11FIP2Q7L804 512 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 MAVSQ7Z434 540 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 COMMD2Q86X83 199 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CLEC1AQ8NC01 280 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 OR52R1Q8NGF1 315 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TRAPPC9Q96Q05 1148 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 OR4K3Q96R72 315 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 MAGIXQ9H6Y5 334 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ANK1P16157 1881 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 A8MVJ9 347 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TMCC2O75069 709 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 OR6B1O95007 311 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CDK4P11802 303 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF24P17028 368 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 SLC5A2P31639 672 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PCGF2P35227 344 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 OR1E2P47887 323 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CDK9P50750 372 aaKnown RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ARFIP1P53367 373 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 GFERP55789 205 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ERV3-1Q14264 604 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 NKAIN1Q4KMZ8 207 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PMS2CLQ68D20 193 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PELI3Q8N2H9 469 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TSPAN14Q8NG11 270 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 WDR20Q8TBZ3 569 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 DIO2Q92813 273 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ERVMER34-1Q9H9K5 563 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 RASSF1Q9NS23 344 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 HPF1Q9NWY4 346 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ATG4BQ9Y4P1 393 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZDBF2Q9HCK1 2354 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 AKAP8O43823 692 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 NSA2O95478 260 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 SLC35E2P0CK97 266 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CD1CP29017 333 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CAPGP40121 348 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 EFR3AQ14156 821 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 NPTX1Q15818 432 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 FAM71E1Q6IPT2 247 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 GALNT10Q86SR1 603 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 ZZZ3Q8IYH5 903 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CARFQ8N187 725 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 GATSQ8NAP1 163 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 RCBTB1Q8NDN9 531 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 TOR1AIP2Q8NFQ8 470 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 SOX17Q9H6I2 414 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 DDX31Q9H8H2 851 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PRDM9Q9NQV7 894 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM181Q9P2C4 612 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 DAPP1Q9UN19 280 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PPIEQ9UNP9 301 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 DIRAS1O95057 198 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 SOX6P35712 828 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 SPEM2Q0P670 501 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 UGT8Q16880 541 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 C3orf38Q5JPI3 329 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 C18orf63Q68DL7 685 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 NANOGNBQ7Z5D8 188 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PAQR7Q86WK9 346 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 MAL2Q969L2 176 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PIP5K1AQ99755 562 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CTRCQ99895 268 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CDADC1Q9BWV3 514 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 LDAHQ9H6V9 325 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 MGAT4BQ9UQ53 548 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 MED16Q9Y2X0 877 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 T-ENOLP0DO92 83 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 NR2C1P13056 603 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 FASLGP48023 281 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 FAM53BQ14153 422 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 SLC35F3Q8IY50 421 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PKP2Q99959 881 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 UCK2Q9BZX2 261 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 KCNN2Q9H2S1 579 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 GPN2Q9H9Y4 310 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 PRAMEF33A0A0G2JMD5 474 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 H0YIG0 161 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 LCMT2O60294 686 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 RHCEP18577 417 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 GPR143P51810 404 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 LIM2P55344 173 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 CSNK2BP67870 215 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 TRA2AQ13595 282 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 GAB4Q2WGN9 574 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms