RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ERVK-6Q9BXR3 956 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 OR10A4Q9H209 315 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 CCDC68Q9H2F9 335 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 NT5DC2Q9H857 520 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SNX15Q9NRS6 342 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 WHRNQ9P202 907 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 PAK5Q9P286 719 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 TRMT6Q9UJA5 497 aaKnown RBP12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 EXO1Q9UQ84 846 aaKnown RBP12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ERVK-19Q9WJR5 959 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 DYRK1BQ9Y463 629 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC22A20A6NK97 555 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 AP3B1O00203 1094 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 UBFD1O14562 309 aaKnown RBP12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 SSX4O60224 188 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 CBR3O75828 277 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 ABCB1P08183 1280 aaPredicted RBP12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 ITGA2P17301 1181 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 RGS4P49798 205 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 SIRPAP78324 504 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF844Q08AG5 666 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 BIKQ13323 160 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 SQLEQ14534 574 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF672Q499Z4 452 aaPredicted RBP12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 IFNEQ86WN2 208 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 PALM2Q8IXS6 379 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 ST13P4Q8IZP2 240 aaPredicted RBP12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 MYO1HQ8N1T3 1032 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 HGDQ93099 445 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 HS6ST2Q96MM7 605 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 NDNQ99608 321 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 SERHLQ9NQF3 203 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 IKZF3Q9UKT9 509 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 MRPS18CQ9Y3D5 142 aaKnown RBP12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 RNF115Q9Y4L5 304 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 KCNE2Q9Y6J6 123 aa12.28□□□□□ -0.44
VCPKMT-201ENST00000395859 IQANK1A0A1B0GTG1 560 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 B4DXG7 233 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 TCF21O43680 179 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 ICOSLGO75144 302 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 FTCDO95954 541 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 C1GALT1C1LP0DN25 315 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 SLC25A16P16260 332 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 ATP5A1P25705 553 aaKnown RBP12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 PAFAH1B1P43034 410 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 TMED10P49755 219 aaKnown RBP12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 DSCR9P59020 149 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 B3GALT5-AS1P59052 145 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 PLIN5Q00G26 463 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 FGFBP1Q14512 234 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 NRF1Q16656 503 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 PRR31Q5SQ13 230 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 NCMAPQ5T1S8 102 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 DESI1Q6ICB0 168 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 SLC30A6Q6NXT4 461 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 WFDC8Q8IUA0 241 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 ACOT4Q8N9L9 421 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 C17orf47Q8NEP4 570 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 OR14L1PQ8NHC6 308 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 LINGO1Q96FE5 620 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 RBM18Q96H35 190 aaKnown RBP12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 NAP1L3Q99457 506 aaPredicted RBP12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 FRMD8P1Q9BZ68 369 aaPredicted RBP12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 ACTR8Q9H981 624 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 PLSCR4Q9NRQ2 329 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 PROCRQ9UNN8 238 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 B3GALT5Q9Y2C3 310 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 CAPN6Q9Y6Q1 641 aa12.27□□□□□ -0.45
VCPKMT-201ENST00000395859 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 TCRBV7S3A2A0A539 114 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 CDC7O00311 574 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ZIC3O60481 467 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 PRAMEF4O60810 478 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 AIFM1O95831 613 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ALOX15P16050 662 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ABCD3P28288 659 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 SRD5A2P31213 254 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 GALNSP34059 522 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 KCNC1P48547 511 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 CDKN2DP55273 166 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 RPP38P78345 283 aaKnown RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 FAPQ12884 760 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 SNTA1Q13424 505 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 SLBPQ14493 270 aaKnown RBP eCLIP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF267Q14586 743 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 PRAMEF9Q5VWM5 478 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 AAGABQ6PD74 315 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 HES6Q96HZ4 224 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 KCNC2Q96PR1 638 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 F2RL3Q96RI0 385 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 NODALQ96S42 347 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 TRIM2Q9C040 744 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 PITHD1Q9GZP4 211 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms