RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MSLNLQ96KJ4 702 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 FCRL1Q96LA6 429 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 MACROD1Q9BQ69 325 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 SLC28A3Q9HAS3 691 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 A0A0A6YYJ9 748 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 PPM1DO15297 605 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 DPM1O60762 260 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 RPL6Q02878 288 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 RPA4Q13156 261 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ZSWIM7Q19AV6 140 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF628Q5EBL2 1059 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 CDH24Q86UP0 819 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 LRRTM4Q86VH4 590 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 KLBQ86Z14 1044 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 F2RL3Q96RI0 385 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF334Q9HCZ1 680 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 KLHL1Q9NR64 748 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 HELZP42694 1942 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 FEZF1A0PJY2 475 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 TEX28O15482 410 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SLC2A10O95528 541 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 NR2F1P10589 423 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ELK1P19419 428 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 HMGA2P52926 109 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 PCBP3P57721 371 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SNRPD1P62314 119 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 GLRX5Q86SX6 157 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 PLCZ1Q86YW0 608 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 TRAPPC5Q8IUR0 188 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 BBS1Q8NFJ9 593 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 PIGKQ92643 395 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 AKAP1Q92667 903 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 MED28Q9H204 178 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 NTNG1Q9Y2I2 539 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 HRGP04196 525 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 CXCL3P19876 107 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SNRPGP62308 76 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 GDPGP1Q6ZNW5 385 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 CYB5D2Q8WUJ1 264 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 AP3S1Q92572 193 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 ABCG5Q9H222 651 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 DMRT3Q9NQL9 472 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 MRPL15Q9P015 296 aaKnown RBP13.53□□□□□ -0.24
CLIP2-203ENST00000395060 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 CSNK1G3Q9Y6M4 447 aa13.53□□□□□ -0.24
CLIP2-203ENST00000395060 B4GALT2O60909 372 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 TRAPPC2P0DI81 140 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 TRAPPC2BP0DI82 140 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 PIPP12273 146 aaPredicted RBP13.52□□□□□ -0.24
CLIP2-203ENST00000395060 CPEP16870 476 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 HLA-DMAP28067 261 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 SLC6A11P48066 632 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 SLC16A1P53985 500 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 PLK5Q496M5 336 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 ESCO2Q56NI9 601 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 PLEKHS1Q5SXH7 462 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.24
CLIP2-203ENST00000395060 C16orf62Q7Z3J2 963 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 CLDN22Q8N7P3 220 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 SPERTQ8NA61 448 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 OR11H4Q8NGC9 324 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 OR6T1Q8NGN1 323 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 BBS10Q8TAM1 723 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 ATF6BQ99941 703 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 DHRS9Q9BPW9 319 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 TMEM38AQ9H6F2 299 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 MGAT4BQ9UQ53 548 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.24
CLIP2-203ENST00000395060 NRG2O14511 850 aaPredicted RBP13.52□□□□□ -0.25
CLIP2-203ENST00000395060 INPPL1O15357 1258 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 KLHL18O94889 574 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 ALDH1A1P00352 501 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 NPPBP16860 134 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 HLA-FP30511 346 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 MTNR1AP48039 350 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 GPR176Q14439 515 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 KLHL22Q53GT1 634 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 C12orf73Q69YU5 71 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 CEP76Q8TAP6 659 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM245Q9H330 911 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 GLTPQ9NZD2 209 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms