RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 ACTR3BQ9P1U1 418 aa12.88□□□□□ -0.35
SMIM29-202ENST00000394990 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
SMIM29-202ENST00000394990 PCDHA9Q9Y5H5 950 aa12.88□□□□□ -0.35
SMIM29-202ENST00000394990 HCFC1P51610 2035 aa12.88□□□□□ -0.35
SMIM29-202ENST00000394990 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 KRT87PA6NCN2 255 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 ASPDHA6ND91 283 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 C9JVG2 144 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 E9PLN8 166 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 PROM1O43490 865 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 HEXAP06865 529 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 HOXB6P17509 224 aaKnown RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 TCN1P20061 433 aaPredicted RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 HRH2P25021 359 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 PTX3P26022 381 aaPredicted RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 GSTM2P28161 218 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 MSX1P28360 303 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CCR8P51685 355 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 ABATP80404 500 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 TAF11Q15544 211 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 SLC5A12Q1EHB4 618 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 PAGE3Q5JUK9 113 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 C6orf10Q5SRN2 563 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 PRAMEF9Q5VWM5 478 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 SLC2A7Q6PXP3 512 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 SPESP1Q6UW49 350 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 SUSD1Q6UWL2 747 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 TRIM73Q86UV7 250 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CHERPQ8IWX8 916 aaKnown RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 KBTBD2Q8IY47 623 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 ADGRF3Q8IZF5 1079 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 VPS37AQ8NEZ2 397 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 TTLQ8NG68 377 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 OR2L8Q8NGY9 312 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 HUS1BQ8NHY5 278 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 DNAJC9Q8WXX5 260 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 APIPQ96GX9 242 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CGREF1Q99674 301 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 VKORC1Q9BQB6 163 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 RNF32Q9H0A6 362 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 VCXQ9H320 206 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 DMRT3Q9NQL9 472 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
SMIM29-202ENST00000394990 ACTR10Q9NZ32 417 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CTSFQ9UBX1 484 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 CIDEBQ9UHD4 219 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
SMIM29-202ENST00000394990 MXRA5Q9NR99 2828 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 A0A096LPI6 279 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 NKX2-6A6NCS4 301 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 MAGEB17A8MXT2 336 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 C2orf74A8MZ97 194 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 PEX1O43933 1283 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 SEMA3DO95025 777 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 GPIP06744 558 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 INHBBP09529 407 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 UMPSP11172 480 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 CDH1P12830 882 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 ACADSP16219 412 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 ALAS2P22557 587 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 PSMA4P25789 261 aaKnown RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 PKLRP30613 574 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 SLC7A1P30825 629 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 TIA1P31483 386 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 GRK3P35626 688 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 GSTM5P46439 218 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 TRPC1P48995 793 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 MS4A2Q01362 244 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 LIPEQ05469 1076 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 DSG2Q14126 1118 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 KRTCAP3Q53RY4 240 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 SPANXN4Q5MJ08 99 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 ANXA8L1Q5VT79 327 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 NANOGP8Q6NSW7 305 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 GALNT18Q6P9A2 607 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 R3HCC1LQ7Z5L2 792 aaKnown RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 PQLC1Q8N2U9 271 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 C8orf44Q96CB5 159 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 TSSK3Q96PN8 268 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 TSPAN10Q9H1Z9 355 aaPredicted RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 NANOGQ9H9S0 305 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 ATAD3AQ9NVI7 634 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 CMTM6Q9NX76 183 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
SMIM29-202ENST00000394990 COQ3Q9NZJ6 369 aa12.86□□□□□ -0.35
SMIM29-202ENST00000394990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms