RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZCCHC10Q8TBK6 192 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 RERGQ96A58 199 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 CTRCQ99895 268 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HDHD5Q9BXW7 423 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ADAP2Q9NPF8 381 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NLGN3Q9NZ94 848 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 EXTL2Q9UBQ6 330 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4Q9UBX2 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 LIPT1Q9Y234 373 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 IGLV3-16A0A075B6K0 115 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 A8MVJ9 347 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 OR10H2O60403 315 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC19A2O60779 497 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NT5EP21589 574 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 CD300CQ08708 224 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SELENBP1Q13228 472 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GBX1Q14549 363 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUSP7Q16829 419 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ATAD3CQ5T2N8 411 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NDUFAF5Q5TEU4 345 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 OR4C11Q6IEV9 310 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ANKK1Q8NFD2 765 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 KLK6Q92876 244 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DPH7Q9BTV6 452 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SIAEQ9HAT2 523 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 AKAP7Q9P0M2 348 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ACSL5Q9ULC5 683 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 WDR45Q9Y484 360 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SESN1Q9Y6P5 492 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ZAR1LA6NP61 321 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 PIPP12273 146 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 F8A1P23610 371 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 RPA4Q13156 261 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 SLAMF1Q13291 335 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 DHCR24Q15392 516 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 GPR68Q15743 365 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 CDH24Q86UP0 819 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 COX18Q8N8Q8 333 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 Q8N9G6 341 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 OR2T33Q8NG76 320 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 OR5D16Q8NGK9 328 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 TREX2Q9BQ50 279 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 LMAN2LQ9H0V9 348 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 XKR8Q9H6D3 395 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 C1GALT1Q9NS00 363 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 HCFC1R1Q9NWW0 138 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 KCNK6Q9Y257 313 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NUMA1Q14980 2115 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 A0A0G2JPF8 293 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 HNRNPCL3B7ZW38 293 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 EMC8O43402 210 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 CSO75390 466 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 HNRNPCL4P0DMR1 293 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 ELAVL4P26378 380 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 TGFBR2P37173 567 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 GZMMP51124 257 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 RAB40BQ12829 278 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 SUZ12Q15022 739 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 OR10G6Q8NH81 332 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 PRRC1Q96M27 445 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 SNX18Q96RF0 628 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 CD180Q99467 661 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NDC1Q9BTX1 674 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 IRAK3Q9Y616 596 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NINQ8N4C6 2090 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 RCBTB2O95199 551 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 CD22P20273 847 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 RPS5P46782 204 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 SF3B4Q15427 424 aaKnown RBP eCLIP11.05□□□□□ -0.643e-70■■■■■ 60.5
UBE2D3-209ENST00000394804 SYPL1Q16563 259 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 TMEM35AQ53FP2 167 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 CCSAPQ6IQ19 270 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NOXA1Q86UR1 476 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 PDZD3Q86UT5 571 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 GID4Q8IVV7 300 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NUP43Q8NFH3 380 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 ENAMQ9NRM1 1142 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 INIPQ9NRY2 104 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NLKQ9UBE8 527 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 ZFR2Q9UPR6 939 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 NCKAP1Q9Y2A7 1128 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 PCDHGA3Q9Y5H0 932 aa11.05□□□□□ -0.64
UBE2D3-209ENST00000394804 C1orf226A1L170 272 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SCAMP1O15126 338 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 GCGRP47871 477 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CENPAP49450 140 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CNIH2Q6PI25 160 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CLEC2DQ9UHP7 191 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 A0A1W2PQ72 361 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 WWP2O00308 870 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 GPX5O75715 221 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms