RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SLITRK5O94991 958 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 PRPS1L1P21108 318 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 SOX18P35713 384 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 NR0B1P51843 470 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 PTGR1Q14914 329 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 IGFBP7Q16270 282 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 FAM180AQ6UWF9 173 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 LARP4Q71RC2 724 aaKnown RBP eCLIP17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF227Q86WZ6 799 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 MIB2Q96AX9 1013 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 C7orf26Q96N11 449 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 HES7Q9BYE0 225 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 TIMMDC1Q9NPL8 285 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 ASF1BQ9NVP2 202 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 MAPRE3Q9UPY8 281 aa17.57■□□□□ 0.4
PDLIM7-204ENST00000393546 SDHDO14521 159 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 SCAMP2O15127 329 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ATP8B1O43520 1251 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF354AO60765 605 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 MANFP55145 182 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 CLDN8P56748 225 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 DCAF7P61962 342 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 FOXK1P85037 733 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF385BQ569K4 471 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 CPTPQ5TA50 214 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 RTL4Q6ZR62 310 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 GALNTL5Q7Z4T8 443 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 DND1Q8IYX4 353 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 NATD1Q8N6N6 113 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 BCORP1Q8N888 145 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF441Q8N8Z8 693 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 FAM98AQ8NCA5 519 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 SIMC1Q8NDZ2 872 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 C17orf47Q8NEP4 570 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 DNAJB8Q8NHS0 232 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ZFP28Q8NHY6 868 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 GRHL3Q8TE85 626 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 CKAP2Q8WWK9 683 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ADIPOR1Q96A54 375 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 CIDECQ96AQ7 238 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ZBED6CLQ96FA7 236 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 SGCZQ96LD1 299 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 ATAD3AQ9NVI7 634 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 NTNG1Q9Y2I2 539 aa17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 PRRC2CQ9Y520 2896 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-204ENST00000393546 A0A087WV62 115 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 CAPN14A8MX76 684 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 PLOD2O00469 737 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 NME2P1O60361 137 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 NADKO95544 446 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 CRYABP02511 175 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 GPX3P22352 226 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 NME2P22392 152 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 EPHA3P29320 983 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 GPC1P35052 558 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 EMDP50402 254 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 DIO3P55073 304 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 NRG3P56975 720 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 DUSP8Q13202 625 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF551Q7Z340 670 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 MDGA2Q7Z553 956 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 SPATA19Q7Z5L4 167 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 ATCAYQ86WG3 371 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 OR7G2Q8NG99 324 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 OR7A2PQ8NGA2 310 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 FAR1Q8WVX9 515 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 ELP4Q96EB1 424 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 MAGEB18Q96M61 343 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 WDR55Q9H6Y2 383 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 ACSS1Q9NUB1 689 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 TAS2R9Q9NYW1 312 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 VPS4AQ9UN37 437 aa17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 KLF13Q9Y2Y9 288 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-204ENST00000393546 GOLGA8QA0A0J9YX86 632 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 GOLGA8OA6NCC3 632 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 GOLGA8NF8WBI6 632 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 KLRC4-KLRK1H3BQV0 150 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 COQ9O75208 318 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 IFI6P09912 130 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 FRKP42685 505 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 PPICP45877 212 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 HSPB3Q12988 150 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 ZNF791Q3KP31 576 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 FHL5Q5TD97 284 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 NXNQ6DKJ4 435 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 OGFOD2Q6N063 350 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 TMEM107Q6UX40 140 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 RIMKLAQ8IXN7 391 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 KRTCAP2Q8N6L1 136 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 GOLM1Q8NBJ4 401 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 COQ8BQ96D53 544 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 SPACA9Q96E40 222 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 HSPBAP1Q96EW2 488 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 LCORQ96JN0 433 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 TAAR6Q96RI8 345 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 BARD1Q99728 777 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 ITPAQ9BY32 194 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 DPY30Q9C005 99 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms