RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TRBV23OR9-2A0A075B6M9 112 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PPM1DO15297 605 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 CSF3P09919 207 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SDC2P34741 201 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 KRT33BQ14525 404 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 HEPACAMQ14CZ8 416 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 MFSD4BQ5TF39 518 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 OR52I1Q8NGK6 324 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PRR14Q9BWN1 585 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SSR3Q9UNL2 185 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 GPR52Q9Y2T5 361 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 ARRDC5A6NEK1 342 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 CENPXA8MT69 81 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 HMGN4O00479 90 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 LILRB5O75023 590 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ENDOUP21128 410 aaKnown RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 CD83Q01151 205 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ZNF658BQ4V348 819 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SNAP47Q5SQN1 464 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ACSM5Q6NUN0 579 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 NRSN1Q8IZ57 195 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ASCC1Q8N9N2 400 aaKnown RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 TM9SF4Q92544 642 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 LRR1Q96L50 414 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 DEPDC7Q96QD5 511 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 NELL2Q99435 816 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 RPP25Q9BUL9 199 aaKnown RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 NPAP1Q9NZP6 1156 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 PLEKHB1Q9UF11 243 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ENOPH1Q9UHY7 261 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SPIN1Q9Y657 262 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 PTPRSQ13332 1948 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 ALPPL2P10696 532 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 RPS25P62851 125 aaKnown RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SPDYE7PQ495Y7 208 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 GLYR1Q49A26 553 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 RD3Q7Z3Z2 195 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC9B2Q86UD5 537 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 UBASH3BQ8TF42 649 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC25A46Q96AG3 418 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 DIRAS2Q96HU8 199 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 NECTIN4Q96NY8 510 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 FERD3LQ96RJ6 166 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 PLA2G2FQ9BZM2 168 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 RACGAP1Q9H0H5 632 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 SZT2Q5T011 3432 aa15.36■□□□□ 0.05
NKX3-1-201ENST00000380871 FAM172BPA6NC97 362 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 C1QTNF3-AMACRE9PGA6 284 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 KAT7O95251 611 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GAB4Q2WGN9 574 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SYT14P1Q58G82 188 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SAXO2Q658L1 398 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 PODNL1Q6PEZ8 512 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 C6orf120Q7Z4R8 191 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 AMER3Q8N944 861 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 RAD51AP1Q96B01 352 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 ZNF717Q9BY31 904 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 RPL36Q9Y3U8 105 aaKnown RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 MTCL1Q9Y4B5 1905 aaKnown RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GLOD5A6NK44 160 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 NDUFB5O43674 189 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 TMCC2O75069 709 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 NME6O75414 186 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GJA4P35212 333 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GSTM5P46439 218 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 MAPK12P53778 367 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 NCF4Q15080 339 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 CDK10Q15131 360 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 TMEM201Q5SNT2 666 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 PAMR1Q6UXH9 720 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 C17orf64Q86WR6 236 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 OR8J1Q8NGP2 316 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SETD6Q8TBK2 473 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 CREB3L4Q8TEY5 395 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GATAD2BQ8WXI9 593 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 NEURL3Q96EH8 262 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 WDR34Q96EX3 536 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 PLA2G12AQ9BZM1 189 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SIRT3Q9NTG7 399 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SEC14L3Q9UDX4 400 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 FABP12A6NFH5 140 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC28A2O43868 658 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 PRKRAO75569 313 aaKnown RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 PAPLNO95428 1278 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 OR12D1P0DN82 309 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 MMP11P24347 488 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 DDOSTP39656 456 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 ZER1Q7Z7L7 766 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 ANKRD53Q8N9V6 530 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 DCLRE1CQ96SD1 692 aaKnown RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 TREX2Q9BQ50 279 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 YIPF4Q9BSR8 244 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 TEX10Q9NXF1 929 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms