RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HCN4Q9Y3Q4 1203 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 COMMD3-BMI1R4GMX3 469 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLC1A7O00341 560 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FFAR1O14842 300 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 HCRTR1O43613 425 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SRPX2O60687 465 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CPNE6O95741 557 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 AGR2O95994 175 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ATP1B1P05026 303 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CYP4B1P13584 511 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 BCKDHBP21953 392 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CXCL12P48061 93 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RAB38P57729 211 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NUP107P57740 925 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CXCR4P61073 352 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CDK5R2Q13319 367 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZBED5Q49AG3 693 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF628Q5EBL2 1059 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 COLEC12Q5KU26 742 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 BROXQ5VW32 411 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 HEPHL1Q6MZM0 1159 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TCTN3Q6NUS6 607 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MFSD12Q6NUT3 480 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CDC73Q6P1J9 531 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ALDH16A1Q8IZ83 802 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR52J3Q8NH60 311 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PHF10Q8WUB8 498 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TANKQ92844 425 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TCTN2Q96GX1 697 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SLC38A3Q99624 504 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ADNPQ9H2P0 1102 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GIN1Q9NXP7 522 aa16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TNRC6BQ9UPQ9 1833 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SLC9B1P1A6NJY1 282 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DUXAA6NLW8 204 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ABCB7O75027 752 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CCNB2O95067 398 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 JUNBP17275 347 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CBLP22681 906 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GSTT1P30711 240 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TTKP33981 857 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 IL5RAQ01344 420 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FHL5Q5TD97 284 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FAM111BQ6SJ93 734 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GPR141Q7Z602 305 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MCATQ8IVS2 390 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PARP8Q8N3A8 854 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TMIGD2Q96BF3 282 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF285Q96NJ3 590 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PINK1Q9BXM7 581 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CHRNA10Q9GZZ6 450 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RAB33BQ9H082 229 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DUSP15Q9H1R2 295 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ANKHQ9HCJ1 492 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ENOPH1Q9UHY7 261 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 A0A087WV62 115 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SYT5O00445 386 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PCDH17O14917 1159 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 B4GAT1O43505 415 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SEMA7AO75326 666 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GPR75O95800 540 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SOX18P35713 384 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EPHA4P54764 986 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RPP38P78345 283 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SHC2P98077 582 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GANABQ14697 944 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C14orf28Q4W4Y0 310 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GPAT3Q53EU6 434 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EXOSC6Q5RKV6 272 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ATAD3BQ5T9A4 648 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF770Q6IQ21 691 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NIPAL1Q6NVV3 410 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 KCTD8Q6ZWB6 473 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR5T3Q8NGG3 340 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR4D11Q8NGI4 311 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF675Q8TD23 568 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OTUB1Q96FW1 271 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ALPK1Q96QP1 1244 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MAP3K3Q99759 626 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TUBA1CQ9BQE3 449 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SLC38A1Q9H2H9 487 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EQTNQ9NQ60 294 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C19orf53Q9UNZ5 99 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SLC9A8Q9Y2E8 581 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 KCNE3Q9Y6H6 103 aa16.88■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NCOR1O75376 2440 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FGF17O60258 216 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PIAS2O75928 621 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OXSR1O95747 527 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 LGI1O95970 557 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 AGXTP21549 392 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EEF1B2P24534 225 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EPHA2P29317 976 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GABRA4P48169 554 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MAPK10P53779 464 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SMIM11AP58511 58 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SKP1P63208 163 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MAD2L1BPQ15013 274 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms