RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GP1BBP13224 206 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 DDCP20711 480 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 RBMS1P29558 406 aaKnown RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 MGAT3Q09327 533 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 DECR1Q16698 335 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 FLYWCH1Q4VC44 716 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SOHLH1Q5JUK2 328 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 OR52E8Q6IFG1 317 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 GOLGA7Q7Z5G4 137 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 LRRC28Q86X40 367 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SLC22A18Q96BI1 424 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF681Q96N22 645 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 AIG1Q9NVV5 245 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ITPK1Q13572 414 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 NKPD1Q17RQ9 610 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 CORO6Q6QEF8 472 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 OR56B4Q8NH76 319 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ASB6Q9NWX5 421 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 PURGQ9UJV8 347 aaKnown RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 H0Y8G0 127 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 HPGDSO60760 199 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SYN1P17600 705 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF763Q0D2J5 394 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ARHGAP11BQ3KRB8 267 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 FAM122BQ7Z309 247 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ZFP41Q8N8Y5 198 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 RBP7Q96R05 134 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ARHGAP39Q9C0H5 1083 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ALKQ9UM73 1620 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 UQCRC2P22695 453 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 NAA10P41227 235 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 WNT4P56705 351 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 MINDY1Q8N5J2 469 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SDSLQ96GA7 329 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF514Q96K75 400 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 CCM2Q9BSQ5 444 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 HES2Q9Y543 173 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 GKP32189 559 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 BRCC3P46736 316 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 GCGRP47871 477 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 TSSK4Q6SA08 328 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SLC22A17Q8WUG5 538 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 MINDY3Q9H8M7 445 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 MIA3Q5JRA6 1907 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 BMP2P12643 396 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 EEF1A1P68104 462 aaKnown RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 EEF1A1P5Q5VTE0 462 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 PCDHGC4Q9Y5F7 938 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 C6orf47O95873 294 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 RSU1Q15404 277 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 TARBP2Q15633 366 aaKnown RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CEP68Q76N32 757 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 RNF170Q96K19 258 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ABHD16BQ9H3Z7 469 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 H3BUI4 141 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 GSRP00390 522 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CPN1P15169 458 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 TAL1P17542 331 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 OR1S1Q8NH92 325 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ST8SIA2Q92186 375 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ACTRT3Q9BYD9 372 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 NKX6-2Q9C056 277 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 DERL2Q9GZP9 239 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 WDR26Q9H7D7 661 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF442Q9H7R0 627 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 Q9N2J8 555 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 C2CD4BA6NLJ0 364 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CASP3P42574 277 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 KCNC1P48547 511 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CNTN2Q02246 1040 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 USP51Q70EK9 711 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 HIST2H3AQ71DI3 136 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 UEVLDQ8IX04 471 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 TRAM1L1Q8N609 369 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 SYNPO2LQ9H987 977 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 IL37Q9NZH6 218 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 SETD1AO15047 1707 aaKnown RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 A0A1W2PQ45 241 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 A0A1W2PQY0 241 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 UNC119BA6NIH7 251 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 WASH4PA8MWX3 477 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 POP4O95707 220 aaKnown RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 PTBP3O95758 552 aaKnown RBP14.6□□□□□ -0.07
COL5A1-201ENST00000371817 RAB7AP51149 207 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 PPP1R3AQ16821 1122 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ENPP7Q6UWV6 458 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 SERPINA12Q8IW75 414 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 ELOVL2Q9NXB9 296 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 COQ4Q9Y3A0 265 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 VSTM5A8MXK1 200 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 DPYSL2Q16555 572 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 FAM214AQ32MH5 1076 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 PIM3Q86V86 326 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms