RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 DESI1Q6ICB0 168 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 CEACAM19Q7Z692 300 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 NRMQ8IXM6 262 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 MYEOVQ96EZ4 313 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 DUS3LQ96G46 650 aaKnown RBP11.1□□□□□ -0.63
COPA-202ENST00000368069 UHRF1Q96T88 793 aaPredicted RBP11.1□□□□□ -0.63
COPA-202ENST00000368069 TAPBPLQ9BX59 468 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 ACTL8Q9H568 366 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 HSFX1Q9UBD0 423 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 AP1M2Q9Y6Q5 423 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
COPA-202ENST00000368069 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 A0A1W2PRG6 482 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 FXYD1O00168 92 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 EEF1E1O43324 174 aaKnown RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 PTGER1P34995 402 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 SIM1P81133 766 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 PDZD3Q86UT5 571 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 TBL1XR1Q9BZK7 514 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 CNIH4Q9P003 139 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 A0A1W2PPK0 400 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 FRS3O43559 492 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 RNGTTO60942 597 aaKnown RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 SEC14L2O76054 403 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 KCNK5O95279 499 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 PYCR1P32322 319 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 CD97P48960 835 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ZNF267Q14586 743 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 CST6Q15828 149 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ODF4Q2M2E3 257 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 FRMPD2BQ6IN97 320 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 LRRC20Q8TCA0 184 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 PHOSPHO1Q8TCT1 267 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 METTL21AQ8WXB1 218 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 RC3H2Q9HBD1 1191 aaKnown RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 PAQR5Q9NXK6 330 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 IMPA1P29218 277 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 MAP3K8P41279 467 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 VSX2P58304 361 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 ZNF613Q6PF04 617 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 RNF111Q6ZNA4 994 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 THSD7AQ9UPZ6 1657 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 A0A1B0GTL3 188 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 H0YIV9 168 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 SCDO00767 359 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 CAPNS1P04632 268 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 GNSP15586 552 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 EPCAMP16422 314 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 CBLP22681 906 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ACVR1BP36896 505 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 NAA10P41227 235 aaPredicted RBP11.09□□□□□ -0.63
COPA-202ENST00000368069 LRIT3Q3SXY7 679 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 FIGNL1Q6PIW4 674 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 NUP54Q7Z3B4 507 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ANKK1Q8NFD2 765 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 UPB1Q9UBR1 384 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 ZNF69Q9UC07 566 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 SCN1AP35498 2009 aa11.09□□□□□ -0.63
COPA-202ENST00000368069 OR6C74A6NCV1 312 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 F11P03951 625 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 ITGB7P26010 798 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 WNT4P56705 351 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 ZNF627Q7L945 461 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 UBE2Q1Q7Z7E8 422 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 SLC44A3Q8N4M1 653 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 OR2A12Q8NGT7 310 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 AKAP1Q92667 903 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPA-202ENST00000368069 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 LRRN3E7EW58 273 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 CD1EP15812 388 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 CR2P20023 1033 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 TM4SF4P48230 202 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 CAMK1Q14012 370 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 AMZ1Q400G9 498 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 PLBD1Q6P4A8 553 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 GDPGP1Q6ZNW5 385 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 THEM6Q8WUY1 208 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 HSPA12BQ96MM6 686 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 TRIM2Q9C040 744 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 LRRN3Q9H3W5 708 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 ZNF385DQ9H6B1 395 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 TMEM184CQ9NVA4 438 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 CROCCQ5TZA2 2017 aa11.08□□□□□ -0.64
COPA-202ENST00000368069 PSMD9O00233 223 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms