RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SAGE2PA6NJ88 616 aa21.31■■□□□ 1
LDB1-201ENST00000361198 CCNB2O95067 398 aa21.31■■□□□ 1
LDB1-201ENST00000361198 GRK5P34947 590 aa21.31■■□□□ 1
LDB1-201ENST00000361198 ARFIP1P53367 373 aa21.31■■□□□ 1
LDB1-201ENST00000361198 NUDT6P53370 316 aa21.31■■□□□ 1
LDB1-201ENST00000361198 ST3GAL4Q11206 333 aa21.31■■□□□ 1
LDB1-201ENST00000361198 OLIG3Q7RTU3 272 aa21.31■■□□□ 1
LDB1-201ENST00000361198 DGLUCYQ7Z3D6 616 aa21.31■■□□□ 1
LDB1-201ENST00000361198 SRFBP1Q8NEF9 429 aaKnown RBP21.31■■□□□ 1
LDB1-201ENST00000361198 CRELD1Q96HD1 420 aa21.31■■□□□ 1
LDB1-201ENST00000361198 SP140LQ9H930 580 aa21.31■■□□□ 1
LDB1-201ENST00000361198 ZSCAN32Q9NX65 697 aa21.31■■□□□ 1
LDB1-201ENST00000361198 A6NCN8 305 aa21.3■■□□□ 1
LDB1-201ENST00000361198 ARRDC5A6NEK1 342 aa21.3■■□□□ 1
LDB1-201ENST00000361198 FAM227AF5H4B4 570 aa21.3■■□□□ 1
LDB1-201ENST00000361198 DSCR3O14972 297 aa21.3■■□□□ 1
LDB1-201ENST00000361198 GUCY1B2O75343 617 aa21.3■■□□□ 1
LDB1-201ENST00000361198 CBLP22681 906 aa21.3■■□□□ 1
LDB1-201ENST00000361198 FEN1P39748 380 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 KCNJ5P48544 419 aa21.3■■□□□ 1
LDB1-201ENST00000361198 SNRPNP63162 240 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 TCTN3Q6NUS6 607 aa21.3■■□□□ 1
LDB1-201ENST00000361198 SLC48A1Q6P1K1 146 aa21.3■■□□□ 1
LDB1-201ENST00000361198 RBM45Q8IUH3 476 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 LYSMD2Q8IV50 215 aa21.3■■□□□ 1
LDB1-201ENST00000361198 OR4D11Q8NGI4 311 aa21.3■■□□□ 1
LDB1-201ENST00000361198 UTP15Q8TED0 518 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 NECTIN4Q96NY8 510 aa21.3■■□□□ 1
LDB1-201ENST00000361198 ZNF607Q96SK3 696 aa21.3■■□□□ 1
LDB1-201ENST00000361198 YIPF4Q9BSR8 244 aa21.3■■□□□ 1
LDB1-201ENST00000361198 CDADC1Q9BWV3 514 aa21.3■■□□□ 1
LDB1-201ENST00000361198 TRPV5Q9NQA5 729 aa21.3■■□□□ 1
LDB1-201ENST00000361198 CCDC59Q9P031 241 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 SEC14L3Q9UDX4 400 aa21.3■■□□□ 1
LDB1-201ENST00000361198 ENOPH1Q9UHY7 261 aa21.3■■□□□ 1
LDB1-201ENST00000361198 KNL1Q8NG31 2342 aa21.3■■□□□ 1
LDB1-201ENST00000361198 ZW10O43264 779 aa21.3■■□□□ 1
LDB1-201ENST00000361198 CNOT3O75175 753 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 PTHP01270 115 aa21.3■■□□□ 1
LDB1-201ENST00000361198 GASTP01350 101 aa21.3■■□□□ 1
LDB1-201ENST00000361198 GABRG2P18507 467 aa21.3■■□□□ 1
LDB1-201ENST00000361198 RGS6P49758 472 aa21.3■■□□□ 1
LDB1-201ENST00000361198 STXBP1P61764 594 aaKnown RBP21.3■■□□□ 1
LDB1-201ENST00000361198 OLR1P78380 273 aa21.3■■□□□ 1
LDB1-201ENST00000361198 TAGAPQ8N103 731 aa21.3■■□□□ 1
LDB1-201ENST00000361198 STX19Q8N4C7 294 aa21.3■■□□□ 1
LDB1-201ENST00000361198 AQP11Q8NBQ7 271 aa21.3■■□□□ 1
LDB1-201ENST00000361198 MAPKAP1Q9BPZ7 522 aa21.3■■□□□ 1
LDB1-201ENST00000361198 C8orf33Q9H7E9 229 aaPredicted RBP21.3■■□□□ 1
LDB1-201ENST00000361198 KCNK12Q9HB15 430 aa21.3■■□□□ 1
LDB1-201ENST00000361198 CPNE5Q9HCH3 593 aa21.3■■□□□ 1
LDB1-201ENST00000361198 KLK4Q9Y5K2 254 aa21.3■■□□□ 1
LDB1-201ENST00000361198 TRBV4-1A0A0J9YWV2 114 aa21.29■■□□□ 1
LDB1-201ENST00000361198 LRRC72A6NJI9 287 aa21.29■■□□□ 1
LDB1-201ENST00000361198 PROM1O43490 865 aa21.29■■□□□ 1
LDB1-201ENST00000361198 NR2F1P10589 423 aa21.29■■□□□ 1
LDB1-201ENST00000361198 F3P13726 295 aa21.29■■□□□ 1
LDB1-201ENST00000361198 TSFMP43897 325 aaKnown RBP21.29■■□□□ 1
LDB1-201ENST00000361198 EIF2B2P49770 351 aaKnown RBP21.29■■□□□ 1
LDB1-201ENST00000361198 SRP54P61011 504 aaKnown RBP21.29■■□□□ 1
LDB1-201ENST00000361198 ZNF181Q2M3W8 571 aa21.29■■□□□ 1
LDB1-201ENST00000361198 ALG11Q2TAA5 492 aa21.29■■□□□ 1
LDB1-201ENST00000361198 COLEC12Q5KU26 742 aa21.29■■□□□ 1
LDB1-201ENST00000361198 KBTBD8Q8NFY9 601 aa21.29■■□□□ 1
LDB1-201ENST00000361198 VANGL1Q8TAA9 524 aaPredicted RBP21.29■■□□□ 1
LDB1-201ENST00000361198 FLVCR1-AS1Q8TAF5 88 aa21.29■■□□□ 1
LDB1-201ENST00000361198 ZNF354BQ96LW1 612 aa21.29■■□□□ 1
LDB1-201ENST00000361198 CDCA4Q9BXL8 241 aa21.29■■□□□ 1
LDB1-201ENST00000361198 NMNAT1Q9HAN9 279 aaPredicted RBP21.29■■□□□ 1
LDB1-201ENST00000361198 IMPAD1Q9NX62 359 aa21.29■■□□□ 1
LDB1-201ENST00000361198 SH3D21A4FU49 640 aa21.29■■□□□ 1
LDB1-201ENST00000361198 BTN3A2P78410 334 aa21.29■■□□□ 1
LDB1-201ENST00000361198 LASP1Q14847 261 aaKnown RBP21.29■■□□□ 1
LDB1-201ENST00000361198 PTGES3Q15185 160 aaKnown RBP21.29■■□□□ 1
LDB1-201ENST00000361198 PRRT3Q5FWE3 981 aa21.29■■□□□ 1
LDB1-201ENST00000361198 ARMCX4Q5H9R4 360 aa21.29■■□□□ 1
LDB1-201ENST00000361198 ZNF770Q6IQ21 691 aaPredicted RBP21.29■■□□□ 1
LDB1-201ENST00000361198 TMEM64Q6YI46 380 aa21.29■■□□□ 1
LDB1-201ENST00000361198 NRROSQ86YC3 692 aa21.29■■□□□ 1
LDB1-201ENST00000361198 C9orf43Q8TAL5 461 aaPredicted RBP21.29■■□□□ 1
LDB1-201ENST00000361198 SEMA3GQ9NS98 782 aa21.29■■□□□ 1
LDB1-201ENST00000361198 ENTPD4Q9Y227 616 aa21.29■■□□□ 1
LDB1-201ENST00000361198 GPC6Q9Y625 555 aaPredicted RBP21.29■■□□□ 1
LDB1-201ENST00000361198 TNFRSF10CO14798 259 aa21.28■■□□□ 1
LDB1-201ENST00000361198 HMGN2P05204 90 aaKnown RBP21.28■■□□□ 1
LDB1-201ENST00000361198 MAGP20916 626 aa21.28■■□□□ 1
LDB1-201ENST00000361198 RPS15AP62244 130 aaKnown RBP21.28■■□□□ 1
LDB1-201ENST00000361198 EOGTQ5NDL2 527 aa21.28■■□□□ 1
LDB1-201ENST00000361198 FBXO42Q6P3S6 717 aa21.28■■□□□ 1
LDB1-201ENST00000361198 C19orf48Q6RUI8 117 aa21.28■■□□□ 1
LDB1-201ENST00000361198 TMEM107Q6UX40 140 aa21.28■■□□□ 1
LDB1-201ENST00000361198 COMTD1Q86VU5 262 aa21.28■■□□□ 1
LDB1-201ENST00000361198 SLC44A3Q8N4M1 653 aa21.28■■□□□ 1
LDB1-201ENST00000361198 POLE4Q9NR33 117 aa21.28■■□□□ 1
LDB1-201ENST00000361198 MS4A12Q9NXJ0 267 aa21.28■■□□□ 1
LDB1-201ENST00000361198 CNOT2Q9NZN8 540 aaKnown RBP21.28■■□□□ 1
LDB1-201ENST00000361198 DUSP12Q9UNI6 340 aa21.28■■□□□ 1
LDB1-201ENST00000361198 ZAR1LA6NP61 321 aa21.27■■□□□ 1
LDB1-201ENST00000361198 C2CD4DB7Z1M9 353 aa21.27■■□□□ 1
LDB1-201ENST00000361198 ZNF45Q02386 682 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms