RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PROX2Q3B8N5 592 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 CACNA1SQ13698 1873 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 B4GALT5O43286 388 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 NPRL3Q12980 569 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 TRMT10BQ6PF06 316 aaKnown RBP8.9□□□□□ -0.99
VPS13A-203ENST00000360280 GOLGA7Q7Z5G4 137 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 SLAMF9Q96A28 289 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 NAA11Q9BSU3 229 aaPredicted RBP8.9□□□□□ -0.99
VPS13A-203ENST00000360280 KCNIP2Q9NS61 270 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 ANGPTL7O43827 346 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 CLCNKAP51800 687 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 KCNAB2Q13303 367 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 MYLK3Q32MK0 819 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 PAQR8Q8TEZ7 354 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.99
VPS13A-203ENST00000360280 GPR22Q99680 433 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF559Q9BR84 538 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.99
VPS13A-203ENST00000360280 RAB6AP20340 208 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LILRA4P59901 499 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SNRPD2P62316 118 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MBLAC2Q68D91 279 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SULF2Q8IWU5 870 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 IL17RCQ8NAC3 791 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OR8J1Q8NGP2 316 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NFAT5O94916 1531 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MYO16Q9Y6X6 1858 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 A0A1W2PQL4 384 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NEMP2A6NFY4 417 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NANOGP8Q6NSW7 305 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 C6orf120Q7Z4R8 191 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF679Q8IYX0 411 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.89□□□□□ -0.999e-7■■□□□ 14.2
VPS13A-203ENST00000360280 FUBP3Q96I24 572 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NANOGQ9H9S0 305 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LIN28AQ9H9Z2 209 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 POPDC3Q9HBV1 291 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SERTAD3Q9UJW9 196 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 POU2F3Q9UKI9 436 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 GRXCR1A8MXD5 290 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SPATA31C1P0DKV0 1188 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 BRCC3P46736 316 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SGCAQ16586 387 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 C4orf17Q53FE4 359 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SFT2D3Q587I9 215 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SSX9Q7RTT3 188 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 CBY1Q9Y3M2 126 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MEIS2O14770 477 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LYPLA2O95372 231 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 HEXBP07686 556 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 KITLGP21583 273 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LIPJQ5W064 366 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MINDY3Q9H8M7 445 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LSM5Q9Y4Y9 91 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 B4DGG1 531 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SIX3O95343 332 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 CLVS2Q5SYC1 327 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 FUT10Q6P4F1 479 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SMIM28A0A1B0GU29 152 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 FUOMA2VDF0 154 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 A8MVM7 634 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 FADS1O60427 444 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 GGT2P36268 569 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ACVR1BP36896 505 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 HLCSP50747 726 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF33AQ06730 810 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MOB1BQ7L9L4 216 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ZDHHC14Q8IZN3 488 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OR1E3Q8WZA6 343 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 UHRF1Q96T88 793 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SLIT3O75094 1523 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 GGT3PA6NGU5 568 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MMP20O60882 483 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 CRTAPO75718 401 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NIPSNAP3BQ9BS92 247 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM233B4DJY2 109 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 DENRO43583 198 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ONECUT3O60422 494 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NDUFV2P19404 249 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 RBMS1P29558 406 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NFATC4Q14934 902 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF585AQ6P3V2 769 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ENPP7Q6UWV6 458 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 ASRGL1Q7L266 308 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM150AQ86TG1 271 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 LIX1LQ8IVB5 337 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NPLOC4Q8TAT6 608 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 HSD17B14Q9BPX1 270 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OSBPL2Q9H1P3 480 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 IL21RQ9HBE5 538 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 PROZP22891 400 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MYF6P23409 242 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 EEF1A2Q05639 463 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SLAMF1Q13291 335 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 TSPYL5Q86VY4 417 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 KIAA1191Q96A73 305 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MKRN2Q9H000 416 aaKnown RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 FHP07954 510 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms