RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 A0A1W2PPV4 95 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 TRBC2A0A5B9 178 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GOSR2O14653 212 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 H6PDO95479 791 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 TMPRSS12Q86WS5 348 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SLC15A3Q8IY34 581 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 ZNRF4Q8WWF5 429 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 HLA-CQ95604 372 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GBA3Q9H227 469 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 PLCXD1Q9NUJ7 323 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GJD2Q9UKL4 321 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CNTN6Q9UQ52 1028 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CAMTA1Q9Y6Y1 1673 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NUDT19A8MXV4 375 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ACOX3O15254 700 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 LATO43561 262 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 DUSP11O75319 330 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 FGF18O76093 207 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CHRM4P08173 479 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GKN3PP0CG01 181 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ASPAP45381 313 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 RNF151Q2KHN1 245 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ZNF160Q9HCG1 818 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 PRR5-ARHGAP8B1AHC4 643 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 POLR1CO15160 346 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 DLX3O60479 287 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RPA2P15927 270 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 MNX1P50219 401 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 PNLIPRP1P54315 467 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ARHGAP8P85298 464 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PLAC9Q5JTB6 97 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 FKBP1CQ5VVH2 108 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ZC3HC1Q86WB0 502 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 LGI4Q8N135 537 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PQLC1Q8N2U9 271 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 SORCS2Q96PQ0 1159 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 HSD17B14Q9BPX1 270 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 URM1Q9BTM9 101 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 PTBP2Q9UKA9 531 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 MCTS1Q9ULC4 181 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 KIAA0355O15063 1070 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 TOXO94900 526 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ONECUT2O95948 504 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ALDOAP04075 364 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 HMGN1P05114 100 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 SERPINA6P08185 405 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RHOQP17081 205 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RAB6AP20340 208 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 S100A7P31151 101 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ACVR1BP36896 505 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RPS24P62847 133 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 ZNF45Q02386 682 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RNF130Q86XS8 419 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 GRAMD2AQ8IUY3 354 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 C1orf127Q8N9H9 656 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 L3MBTL4Q8NA19 623 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 OR51G2Q8NGK0 314 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 OR13C4Q8NGS5 318 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 OR9A2Q8NGT5 310 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 OR14K1Q8NGZ2 314 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 C12orf49Q9H741 205 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RAB9BQ9NP90 201 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 DERAQ9Y315 318 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 CD8B2A6NJW9 211 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 CD8BP10966 210 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ZNF44P15621 663 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 MAPK3P27361 379 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 ST3GAL3Q11203 375 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 CMTM8Q8IZV2 173 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 TFGQ92734 400 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 RAB8BQ92930 207 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 SPTSSAQ969W0 71 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 CDC6Q99741 560 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RNF32Q9H0A6 362 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ARPC4-TTLL3A0A0A6YYG9 625 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 TCRBV9S1A1TA0A576 114 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 EFCAB7A8K855 629 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 AQP2P41181 271 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 OR1E2P47887 323 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 EID2Q8N6I1 236 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ACBD4Q8NC06 268 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 G6PC3Q9BUM1 346 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ENKD1Q9H0I2 346 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 MTCH1Q9NZJ7 389 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PEX16Q9Y5Y5 336 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 AGPAT2O15120 278 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ZNF821O75541 412 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 CD1CP29017 333 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms